| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2544 |
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| Symbol | |
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| ID | 4604791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3054370 |
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| End bp | 3054876 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781939 |
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| Product | TRAP-type transport system, small permease component |
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| Protein accession | YP_928416 |
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| Protein GI | 119775676 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.809029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAAC TGATTGGATT TTTTGAGGGG ATAACTGAGG CCCTGGGGCG GCTGGTGGGG
TGGTTTACCC TTGGCATGGT GCTGATGACC CTCGCCGTGG TAGTGCTCCG CTATGCCTTT
GCAACCGGCG CCACGGCGCT GCAGGAAACA GCGCTTTATC TTCATGGTGC CGTTTTTACC
CTGGCTGCGG GTTTTACCCT GAAACGGGAT GCCCATGTGC GGGTTGACGT CTTTTATCGC
CAGTGCAGTG AGCGCACCCG TCATTGGATA GATTTTGTCG GTACCCTGGT GTTTCTGTTT
CCCCTGTCTC TTGCCATAGG CCTGTACAGT TTTGATTATG TGATGAATGC CTGGCGCATT
CAGGAAAGCT CTGCAGAGGC TGGTGGCCTG CCCTGGGTTT ACCTGCAAAA GTCACTGCTG
CTGGGGCTGT GCGTAAGTTT GATATTGCAG GGATTGTGTG AACTTTACCG TCATGGCAAG
GCGCTCTTTG GCAGGGAGGC TTGCTGA
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| Protein sequence | MGKLIGFFEG ITEALGRLVG WFTLGMVLMT LAVVVLRYAF ATGATALQET ALYLHGAVFT
LAAGFTLKRD AHVRVDVFYR QCSERTRHWI DFVGTLVFLF PLSLAIGLYS FDYVMNAWRI
QESSAEAGGL PWVYLQKSLL LGLCVSLILQ GLCELYRHGK ALFGREAC
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