| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0355 |
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| Symbol | murC |
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| ID | 4602611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 425464 |
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| End bp | 426918 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639779684 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_926236 |
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| Protein GI | 119773496 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000792879 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACAGA CAGAGAAGTA CAGACAGCTT CGTACCATGA TCCCCGAGAT GCGCCGCGTG
CGCCGCATCC ACTTTGTTGG CATCGGCGGG GCCGGTATGG GCGGGATCGC CGAAGTACTG
GTGAACGAAG GCTATCAGGT CAGCGGGTCG GACATTGCCG ACAATGCCGT GACAGAGCGT
CTGGGAAGTC TGGGTGCCCG TATTTTTATA GGTCATGGCG CCGATAACGT CAGTGGTGTG
GATGTAGTGG TGGTATCGAC CGCCATCAAG CACGACAACC CTGAAATCGC TGCGGCCAAA
GAGAAGCGTA TTCCCATTGT GCGCCGTGCA GAGATGCTTG CCGAGCTGAT GCGTTATCGC
CATGGCGTGG CCGTTGCCGG TACCCACGGT AAAACCACCA CTACCAGTTT GATTGCCAGT
ATCTATGGGC AGGCCGAGCG TGACCCGACT TTTGTGATTG GTGGGCTGCT TAACAGTGCC
GGTACCAATG CCCGTCTGGG CTCAAGCCGT TATCTGATTG CCGAAGCCGA CGAGAGTGAT
GCGAGCTTCC TGCACCTGCA GCCAATGGTG ACCGTGGTCA CCAACATCGA AGCCGACCAC
ATGGATACCT ATGGCGGTGA CTTCGAAAAG CTCAAGTCCA CTTTCGTGGA TTTTATGCAC
AATCTGCCGT TTTACGGTGT GGCCGTGGTC TGCGTGGACG ACCCTGTGGT GCGCGAGCTT
ATCCCACGCA TTGGCCGCCA GGTAGTGACT TATGGTTTCA GTGACGATGC CGACGTGCAG
GCGCTGAACT TTGTACAGGA AGGCCACAGC TGCCGCTTTA CCGTGCGCCG CAAGGGCAAA
GACGATCTGT CGCTCAAGGT CAATCTGCCG GGGCAGCACA ATGTGCTTAA CTCCCTGGCG
GCCATTGCCG TGGCCACCGA GGATGACATT GAAGACGAGG CTATCGTCAA GGCGCTGGCC
GAATTCCAGG GCATTGGCCG CCGCTTCCAG CATCTGGGTA AGTTTGCGAC CCCCAACGGT
GAGGTCATGC TGGTGGATGA CTACGGCCAC CACCCCAGCG AAGTGCTTGC GACCATTAAA
GCCGCCCGCG CCGGTTGGCC CGATAAGCGC CTTGTGATGG CCTATCAGCC CCACAGGTAC
ACACGTACCC GTGACCTGTA CGAGGACTTC GTCGAGGTCT TGTCTCAGGT CGACAAGCTG
GTATTGCTGG AAGTGTACGC CGCGGGCGAA ACGCCCATTC CCGGCGCTGA TGGCCGCGCC
TTATGCCGCT CAATCCGTCA GCGTGGTCAG TTGGAACCGA TTTTTGTGGC AAGCCCAGAG
CAGCTGACAT CAGTGCTGCC GGATGTGTTG GCCGATGGCG ATCTACTGCT GTGTCAGGGC
GCAGGCAATA TAGGTGCCTT GTCCCGGGAG TTGGCGGCGA CAGAGCTTGG ATTTGCCAAG
GTGGAAAATA ACTGA
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| Protein sequence | MTQTEKYRQL RTMIPEMRRV RRIHFVGIGG AGMGGIAEVL VNEGYQVSGS DIADNAVTER
LGSLGARIFI GHGADNVSGV DVVVVSTAIK HDNPEIAAAK EKRIPIVRRA EMLAELMRYR
HGVAVAGTHG KTTTTSLIAS IYGQAERDPT FVIGGLLNSA GTNARLGSSR YLIAEADESD
ASFLHLQPMV TVVTNIEADH MDTYGGDFEK LKSTFVDFMH NLPFYGVAVV CVDDPVVREL
IPRIGRQVVT YGFSDDADVQ ALNFVQEGHS CRFTVRRKGK DDLSLKVNLP GQHNVLNSLA
AIAVATEDDI EDEAIVKALA EFQGIGRRFQ HLGKFATPNG EVMLVDDYGH HPSEVLATIK
AARAGWPDKR LVMAYQPHRY TRTRDLYEDF VEVLSQVDKL VLLEVYAAGE TPIPGADGRA
LCRSIRQRGQ LEPIFVASPE QLTSVLPDVL ADGDLLLCQG AGNIGALSRE LAATELGFAK
VENN
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