| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0072 |
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| Symbol | pbpG |
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| ID | 4602329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 77895 |
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| End bp | 78806 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779384 |
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| Product | D-alanyl-D-alanine endopeptidase |
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| Protein accession | YP_925954 |
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| Protein GI | 119773214 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATCCA AATTGTTCAA GTACATCAGC CCTCTGCTGA TGCTCGGCCT GCTCTCGGCG
ACCAGTGCTC AGGGCGCGGT AAAATCAGAC GCCAAACCCA CTCAGGAACT GGCTTCATAC
AGTGCACTCC TGGTCGATAC CAAAACCAAC GAAGTGCTCT ATGCCAGTAA CCCCCATCAG
GTTGTTCCTA TTGCCTCGAT CTCCAAGCTG ATGACTGCCA TGGTGACCCT GGATGCCAAG
CTCCCGCTCG GGGAAAAAAT CGCGGTTGAA GTCAAAGACA ACCCCGAGAT GAAAAACGTC
GTTTCCCGCA TCCGGCTTGG CAGCACCCTG AGCCGTAAAG AAGCCATGTT GCTCACCCTG
ATGTCGTCGG AAAACCGCGC CGCCACCACC CTTGCCCATC ATTACCCCGG AGGATATCAG
GCCTTTGTGA AGGCGATGAA TGCCAAGGCC AAGGCATTGG GTATGACCAA CACCCGCTTT
GTTGAGCCCA CAGGATTGTC GGTACACAAC GTGTCTACCG CCGCCGATTT GGTGAAGCTG
CTCAAGGCCG CGCAGGATTA CCCTCTACTG GGCCAGCTCT CTTCGACACC AAGTAAGTCG
GTAACCTTTG GCAAACCCAG ATACAGTTTG GCGTTTTACA ACACCAACCG ACTGGTCAAC
AAAGACAATT GGGACATTCG CTTAACCAAA ACCGGTTTCA CCGATGCCGC CGGACACTGC
CTGGTGATGT TGACCAAGAT GGCCAAACGG GATGTGGCCT TTGTGGTGCT CGACTCTTTC
GGTAAACAAA CCCACCTCGG CGATGCCGGA CGCCTGAAAA AATGGCTCGA AACCGGTAAA
GTCAGCCCAC TGCCTGACTC CGCCAAAACT TATAAAGAAC AACGCAAGCG TGAGCGTAAT
AACAAGGCAT AA
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| Protein sequence | MKSKLFKYIS PLLMLGLLSA TSAQGAVKSD AKPTQELASY SALLVDTKTN EVLYASNPHQ
VVPIASISKL MTAMVTLDAK LPLGEKIAVE VKDNPEMKNV VSRIRLGSTL SRKEAMLLTL
MSSENRAATT LAHHYPGGYQ AFVKAMNAKA KALGMTNTRF VEPTGLSVHN VSTAADLVKL
LKAAQDYPLL GQLSSTPSKS VTFGKPRYSL AFYNTNRLVN KDNWDIRLTK TGFTDAAGHC
LVMLTKMAKR DVAFVVLDSF GKQTHLGDAG RLKKWLETGK VSPLPDSAKT YKEQRKRERN
NKA
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