Gene Sama_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0071 
Symbol 
ID4602328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp77654 
End bp77893 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content54% 
IMG OID639779383 
Producthypothetical protein 
Protein accessionYP_925953 
Protein GI119773213 
COG category[R] General function prediction only 
COG ID[COG2388] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCTG TGATCCACGA TAAAACCAAT CAGGTATTTT TATTAGCGGC CAACGGCGTG 
GAAGCCAGGC TGGAGTACCA CCGCCAGGGT GACTGTATCG ACTTCAATCG CACCTTCGTT
CCTCCTGAGC TCAGGGGGCA AGGTCTGGCC GAAAAACTGG TCCGCTACGG GCTGGAATGG
GCCAGGAAGC AGGGGCTCGA CATTCACGCC AGCTGTTGGT ACGTTCAAAA ATTCCTCTAA
 
Protein sequence
MDAVIHDKTN QVFLLAANGV EARLEYHRQG DCIDFNRTFV PPELRGQGLA EKLVRYGLEW 
ARKQGLDIHA SCWYVQKFL