| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0049 |
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| Symbol | |
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| ID | 4602306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 51951 |
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| End bp | 52523 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779358 |
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| Product | SUA5/YciO/YrdC-like protein |
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| Protein accession | YP_925931 |
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| Protein GI | 119773191 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.251569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTTTAA TGTTGCAGGT AACTCCCTCT CAAATCAGTG GCATCATCGA AAGTGGCGGC
GTTGTGGCCT ATCCCACAGA GGCCGTATAT GGTTTGGGAT GCGATCCGGA CAACGATACC
GCTATACAAA AGCTCTTGGC AGTAAAGCAG CGCCCTTGGG AAAAAGGTTT AATTCTGATT
GCCAGCAGCT TTGACCAGCT GAAACCCTAT ATTGACTTAA GTCGGGTGAC CGAGGCCCAG
TTACAGGCTG CATTTGATAA ATGGCCAGGC CCTTTTACCT TTGTCATTCC CGCGAAAGCC
GATGTATCGC CTATGCTCAG GGGCTGCTTT GATACCATTG CCGTTAGGGT GTCGGCCCAT
CAGGACGTAC GTGCCATGTG TTATGCCTGC CAAAAACCGC TGGTATCCAC CAGTGCCAAC
TTGGCAGGGG AACAGCCAGC CCTGACATTG GCTGAAGTTC AAACTCAGCT GGGTGATAAA
ATCGACGCCG TGGTGTTGGG AGCGCTGGGG CAATCTTGTC AGCCATCCAC CATTATCGAT
ATTCAAACCG GACATATTTT CAGACAAGGA TAA
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| Protein sequence | MTLMLQVTPS QISGIIESGG VVAYPTEAVY GLGCDPDNDT AIQKLLAVKQ RPWEKGLILI
ASSFDQLKPY IDLSRVTEAQ LQAAFDKWPG PFTFVIPAKA DVSPMLRGCF DTIAVRVSAH
QDVRAMCYAC QKPLVSTSAN LAGEQPALTL AEVQTQLGDK IDAVVLGALG QSCQPSTIID
IQTGHIFRQG
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