| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0045 |
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| Symbol | |
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| ID | 4602302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 48882 |
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| End bp | 49898 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779354 |
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| Product | DNA processing protein DprA, putative |
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| Protein accession | YP_925927 |
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| Protein GI | 119773187 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.064372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.147365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTGG ACGAGTTAAG ACAAAGGCTG GAAACGGAGA AAGACTCCCT GCCTTTGTCC
CCCTCTCTGC GGTCCGGCTT GGTTGTGGAT TACCGCTTGG TGGATGCGGC GTTGCAATGG
CAAGACGCAT CCACTGCCCA CCACCTTATC TGTTTTGATG ACCCTCGTTA TCCTCCATTA
CTCAAAACCA TCACAGACCC ACCCATCTTT CTTTTTGTGA GAGGTCAGGC TGAGGCTTTG
TTGCGACCTT CTGTTGCCAT GGTGGGCAGC CGGGCTGCGA GTTACAGCGG GCTGCAAACG
GCCAGAATGC TGGCGTCCGG ACTCGCAGGT TATGGCTTTG CCGTTGTCAG CGGCTTGGCG
GCGGGGATTG ATGGCGCCAG TCATCAGGGA GCATTGGCCG CCAGCGGCGT GACCCATGCG
GTGCTTGGCA CGGGGATTGA TGAAATCTAC CCCAAAAAGC ATGCCCATCT GGCCAATGAC
ATTTTACTGA GAGGTTGCAT CGTCAGTGAG TTCTGGCCGG GCACGCCCGT GTTTGCCGGT
AACTTTCCGA AGCGAAACCG TATTGTCACG GGAATGGCCC TGGGTACTCT GGTGGTTGAG
GCAGCCAGAA AGAGCGGCTC GTTAATTTCC GCCAGACTGG CGATGGAGCA AGGCAGGGAG
GTTTTCGCCG TGCCCGGCTG CGTATTGGAT GAACGACATC AGGGATGTCA TGATTTGTTG
CGACAGGGGG TAAAACTTGT TTGCGACGCT GCCGATATAG TGGAGGAACT AGGCAGTATG
TTGAGTTGTC AGCTTGATAT GTTGCCCCAA AGCCCCCATA TGCAAGCTGA AAGTGGTCAG
GAGTTGCCTT ACCCGGAGCT CTTGGCTAGT GTAGAGTATG AGACCACACC CATAGACAGG
TTGGTGGAAC ATAGTGGTAA ACCGATAGAT CTTGTGCTGG AACAAATACT TGAGTTGGAG
TTACAAGGTT GGGTTGCTGC AGTACCCGGT GGTTACGTCA GAGTGAAGAG GAATTAG
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| Protein sequence | MDVDELRQRL ETEKDSLPLS PSLRSGLVVD YRLVDAALQW QDASTAHHLI CFDDPRYPPL
LKTITDPPIF LFVRGQAEAL LRPSVAMVGS RAASYSGLQT ARMLASGLAG YGFAVVSGLA
AGIDGASHQG ALAASGVTHA VLGTGIDEIY PKKHAHLAND ILLRGCIVSE FWPGTPVFAG
NFPKRNRIVT GMALGTLVVE AARKSGSLIS ARLAMEQGRE VFAVPGCVLD ERHQGCHDLL
RQGVKLVCDA ADIVEELGSM LSCQLDMLPQ SPHMQAESGQ ELPYPELLAS VEYETTPIDR
LVEHSGKPID LVLEQILELE LQGWVAAVPG GYVRVKRN
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