| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0042 |
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| Symbol | |
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| ID | 4602299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 46088 |
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| End bp | 47050 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639779351 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_925924 |
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| Protein GI | 119773184 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.601603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.144256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGCCAC TGAAAATCAT CTTTGCTGGC ACGCCGGATT TTGCTGCCCG CCACCTGCAG
GCCCTGCTGA CATCTGAGCA TGAAGTCATA GCCGTCTACA CCCAACCCGA CCGTCCCGCC
GGACGGGGGC AAAAACTCAC ACCCAGCCCG GTGAAGTCAC TGGCGCTTGA ACACCAGATC
CCTGTTTATC AGCCTAAATC TCTTCGCAAA GAAGAAGCGC AGCAGGAACT GGCGGCCCTC
GGTGCCGACA TCATGGTGGT GGTGGCCTAT GGCCTGATCC TGCCCAAGGT GGTGCTGGAT
ACTCCACGCC TCGGCTGCAT CAATGTTCAC GGCTCCATTC TGCCGCGCTG GCGCGGCGCG
GCACCAATTC AACGCGCCCT GTGGGCCGGT GACACCGAGA CCGGAGTCAC CATCATGCAA
ATGGATGTGG GTCTGGATAC CGGCGATATG CTGCTGAAAA CCCATCTACC CATCGAAGAT
GACGACACCT CCGCCAGCCT GTATGAAAAA CTGGCCGGTC AAGGCCCGGC GGCACTGTTG
GACGCCCTCG CCGCCCTCAG TGAAGGCACC TTGAGCGCCG AAAAGCAGGA CGAAGCACTG
GCCAACTATG CTGAGAAGCT CAGCAAAGAA GAGGCACGTC TCGATTTTGC CAAGCCCGCC
AAAAATCTGT GGCAGGAAGT ACGTGCCTTT AACCCCTGGC CGGTGAGCTA TTTTGAGCAT
CAGGGACAGA CCATCAAGGT ATGGCAGACA AGTGTGCTGG CTGAACCCAG CACCAAGGCG
TCCGGCACCA TAGTTGCCGC AGGTAAACAA GGCATAGACA TCGCTACTGC CGATGGCATG
CTGCGCATTC ATAAAATGCA GCTGCCCGGT AAAAAGCCGA TGGACGTGGC CGACATCCTC
AATAGCCGTG GTGACTGGTT CACTCCCGGC ACCCTGCTGG CAAGCCCAGA GGCAAGTGAG
TAA
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| Protein sequence | MKPLKIIFAG TPDFAARHLQ ALLTSEHEVI AVYTQPDRPA GRGQKLTPSP VKSLALEHQI
PVYQPKSLRK EEAQQELAAL GADIMVVVAY GLILPKVVLD TPRLGCINVH GSILPRWRGA
APIQRALWAG DTETGVTIMQ MDVGLDTGDM LLKTHLPIED DDTSASLYEK LAGQGPAALL
DALAALSEGT LSAEKQDEAL ANYAEKLSKE EARLDFAKPA KNLWQEVRAF NPWPVSYFEH
QGQTIKVWQT SVLAEPSTKA SGTIVAAGKQ GIDIATADGM LRIHKMQLPG KKPMDVADIL
NSRGDWFTPG TLLASPEASE
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