| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0040 |
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| Symbol | trkA |
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| ID | 4602297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 43378 |
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| End bp | 44787 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779349 |
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| Product | potassium transporter peripheral membrane component |
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| Protein accession | YP_925922 |
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| Protein GI | 119773182 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.165147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA TCATCTTGGG CGCAGGTCAA GTCGGGGGCA CCCTCGCAGA AAACCTGGTG
GGTGAAAACA ACGACATCAC CATAGTCGAC AGCGATAAAA ACAAACTGCG CAGCCTGCAG
GACAAGTACG ATCTGCGGGT AGTCGTCGGT CATGGTGCTC ACCCGGACGT GCTGCGCGAA
GCCGGCGCCG AAGATGCTGA CATGCTGATT GCCGTGACCA ACAGCGACGA GTGCAATATG
TCGGCCTGCC AGATTGCCTA CACCCTGTTT GGTACCCCCA CCAAGATTGC CCGTATCCGC
TCTGAGCAGT ATCTGCACAT GCAGGAGCGG CTGTTTATCG ACAGTGAAAC CAAAAACTCC
GATAACCGCA CCCGCGGCGG CTTCGTCATT GACGAACTGA TTGCCCCCGA GCAATTGGTG
ACGTCCTATA TTCAGCGACT GGTGGAATAT CCGGGAGCCC TGCAGGTGTT GGAGTTTGCC
GAAGGCAAGC TGAGTCTGGT GGCAGTAAGG GCTTACTACG GCGGGCCCTT GGTGGGTAAT
GCCCTGGCCG CATTGCGGGA ACACATGCCC AATATTGATA CCCGTGTTGC CGCTATTTTC
CGCCAGGGAC GACCCATCAT GCCCCGGGGT ACCACCATTA TAGAGGCGGA CGATGAAGTC
TTCTTTGTGG CCGACAGTCG CCATATCCGC GCGGTAATGA GTGAAATGCA AAAGCTCGAT
AACAGCTATC GCAACATCAT GATTGCCGGT GGTGGCAATA TTGGTCTTGG GCTGGCGAAA
AAGCTCGAGC GCAATCACTC GGTAAAACTG ATTGAGCACA AGGCAGAGCG TGCCGAGGCC
CTGTCAGAGA AGCTACAAAA TACCACTGTT TTTTGCGGTG ATGCCTCGGA TCAGGAGCTG
TTGCTCGAAG AGCATATCGA TCAGACCGAC GTCTTCATTG CCGTCACCAA CGACGATGAA
GCCAACATCA TGTCGGCGCT ACTGGCAAAA CGCATGGGCG CTAAAAAAGT GATGGTGCTT
ATTCAGCGTG AAGCCTATGT GGATATCGTT CAGGAAGCCA ATATCGATAT CGCGATTTCG
CCGCAGCAAG CCACCATTTC TGCACTGCTG ACCCATATCC GTCAGGGCGA TATCTGTAAC
GTATACTCCC TGCGCCGCGG CGCCGCCGAG GCTATCGAGG CAATCGCCCA CGGAGATCCC
AGCACGTCTA AGGTAGTAGG CAAACAAATC GGGGAAATCC GCTTGCCGCC GGGCACCACC
ATTGGCGCCA TTGTTCGCAA TGATGAAGTG CTGATGGCCC ACGATAAAAC CGTGATCGAA
CAGGGCGACC ATGTGATCCT CTTCCTGGTA AACAAGAAAT TTATCGGCGA GGTCGAACGG
TTGTTCCAAC CCAGCGCTTT CTTCTTCTAA
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| Protein sequence | MKIIILGAGQ VGGTLAENLV GENNDITIVD SDKNKLRSLQ DKYDLRVVVG HGAHPDVLRE
AGAEDADMLI AVTNSDECNM SACQIAYTLF GTPTKIARIR SEQYLHMQER LFIDSETKNS
DNRTRGGFVI DELIAPEQLV TSYIQRLVEY PGALQVLEFA EGKLSLVAVR AYYGGPLVGN
ALAALREHMP NIDTRVAAIF RQGRPIMPRG TTIIEADDEV FFVADSRHIR AVMSEMQKLD
NSYRNIMIAG GGNIGLGLAK KLERNHSVKL IEHKAERAEA LSEKLQNTTV FCGDASDQEL
LLEEHIDQTD VFIAVTNDDE ANIMSALLAK RMGAKKVMVL IQREAYVDIV QEANIDIAIS
PQQATISALL THIRQGDICN VYSLRRGAAE AIEAIAHGDP STSKVVGKQI GEIRLPPGTT
IGAIVRNDEV LMAHDKTVIE QGDHVILFLV NKKFIGEVER LFQPSAFFF
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