| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0021 |
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| Symbol | |
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| ID | 4602278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 19768 |
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| End bp | 20493 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639779330 |
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| Product | hypothetical protein |
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| Protein accession | YP_925903 |
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| Protein GI | 119773163 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00312119 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTAGTC TTCAGTTAAA TGCCGATGTG GGCGAAGGCT ACCCCTTCGA TGCCGACATT
ATCGCGCTGG TAGATGCCGC CAATATCGCC TGTGGTGGCC ACGCGGGTGA CTCAAACAGC
ATGCGCGCTA CAGTGAAACT TGCGATTGCC AACGGCTGCC TGATTGGCGC CCATCCGTCA
TTCCCCGATA AAGCCAACTT TGGCCGCCAG CCCATGCGTA TGGAAGCCAT TGCGCTGACC
ACCAGCCTTA TCGACCAAAT TCAAGCCCTG AAGCAAATTT GCGATGAAGA AGGCGCAACC
ATGTTTCACG TGAAACCCCA CGGCGCCCTC TACAATCAGG CAGCGTTCGA TAAAGAACTG
GCCTCATGCC TTATTGAGGC GATACAGGCC GTCGACGCCA AGCTGGTGCT CATGGGCTTA
GCAGCAAGCC CACTGCTGCA ATGGGCCCGT GAGGCAGGCC TTCGGGTGCA GGCAGAGGCC
TTTGCCGACC GCCGCTACGA AGCGGACGCC ACCCTGGTGT CGAGGCAACA ACCGGGGGCA
GTGATCCACA ACCAAGCCGA AGCGCTGGCA CAGGTGCAGG CGTTAATGTC AGGCAGCCTC
ACCAGTATTG ATGGCGCCCG CCTCAGGCTT AGGGCCGACA CTCTGTGCCT GCACGGTGAC
AATCCCGAGG CGTTGCAGTT TGCCCGCCGC ATACGGGCAT TGCTGGAGAC GAGCCATGCT
GACTGA
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| Protein sequence | MSSLQLNADV GEGYPFDADI IALVDAANIA CGGHAGDSNS MRATVKLAIA NGCLIGAHPS
FPDKANFGRQ PMRMEAIALT TSLIDQIQAL KQICDEEGAT MFHVKPHGAL YNQAAFDKEL
ASCLIEAIQA VDAKLVLMGL AASPLLQWAR EAGLRVQAEA FADRRYEADA TLVSRQQPGA
VIHNQAEALA QVQALMSGSL TSIDGARLRL RADTLCLHGD NPEALQFARR IRALLETSHA
D
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