Gene Sama_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0006 
Symbol 
ID4602263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4686 
End bp5186 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content50% 
IMG OID639779315 
Producthypothetical protein 
Protein accessionYP_925888 
Protein GI119773148 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000616557 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAATT TTACAGCGGG TTTGAATAAT TTTTGGGTTG GGCTGGTTAC CGGCTTGCTG 
ATGCCTTTGA TTGTCGTGGC GACGCTTTTA TACCTGACCG TGGATAAGTT GACCGGGGTG
GTGCAGGACT CGGCCATTTC GCCCTTTCTT GAGCGCAGCG AGCAGACTCT GGATAAGGTC
GACAGTTTGC TGGTGACTCT GGATAGTAAA GTCGACAGTG CCGATCTCAA AGATCTTGAG
CTGCTTACAC CACTGAAGAA CGCCAATATT TTGCCTGATC TACAGGACAT TGCCAGCGCT
GCGGCTGAGC TTAAAACCAA GGTGAACGAT ATAGACAGAG AAACAGTGAT CACCGCCCTT
CGCCATAAGC TGACAACCTC ACTGGCAGGC AAATTCCCCG AGGAAAAGGC GCAGGAGCTG
GCTATCCATT TGGAAAGTAT TGCCCGGTTA CTGGCACAGC AAAGCGATGA GTTTGAGCAA
AACACTCCGG TAACCCAATA G
 
Protein sequence
MKNFTAGLNN FWVGLVTGLL MPLIVVATLL YLTVDKLTGV VQDSAISPFL ERSEQTLDKV 
DSLLVTLDSK VDSADLKDLE LLTPLKNANI LPDLQDIASA AAELKTKVND IDRETVITAL
RHKLTTSLAG KFPEEKAQEL AIHLESIARL LAQQSDEFEQ NTPVTQ