Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1831 |
Symbol | |
ID | 4082183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1925390 |
End bp | 1926598 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638010206 |
Product | HI0933-like protein |
Protein accession | YP_616876 |
Protein GI | 103487315 |
COG category | [R] General function prediction only |
COG ID | [COG2081] Predicted flavoproteins |
TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000611752 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.363311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTGGC GATCGCAAAG CTGCACTGAC GCCTGCGTGG CAGTATTCGA TTATGACGCC ATCGTGCTGG GTGCCGGCGC GGCCGGGCTG ATGTGCGCCG CGGTCGCGGG GCAGCGGGGG CGGCGCGTCC TGCTGCTCGA TCACGCCGAC GAGGTGGGCA AGAAAATCCT GATTTCGGGC GGCGGTCGCT GCAATTTCAC CAACATCTAC ACGCGCCCCG AAACCTATAT TTCGGCGAAC CCGCATTTCG CGAAGTCGGC GCTCGCGCGC TACGCCCCCG CCGACTTCAT CGCGCTCGTC GAGCGCCATG GCATCGCATA TCATGAAAAG ACGCTCGGCC AGTTGTTCTG CGATGGATCG GCGAAGCAGG TCGTGGCGAT GCTGCTCGAC GAATGCGCAA GGGGCGGCGT CGACGTCCGC TGCGGGCAGC CGGTGCGTCA GGTTACCCAC GCCGACGGTC GGTTCGCTGT CCGCTTCGGC GACCTGGACT TCGCCGCCCC CAATCTTGTC ATTGCGACAG GCGGGCCTTC GATCCCGAAG ATGGGCGCGT CCGGTTTCGC TTATGATCTC GCCCGCCAAT TCGGCCTCAA GGTCGTCGAG CCGCGCCCTG CGCTCGTCCC GCTGACGCTT GGCGGCGACG ATGTGCTGTT CCGCGAGTTG TCGGGCGTTG CGACGCCGGT CGAGGCGCGC GCGGGCAAGG CGGCGTTTCG CGAAGCCGCG CTCTTCACGC ACAAGGGGCT TTCCGGTCCG GCAATCCTTC AGGTCAGCAG CTATTGGCGC CACGGCGAAC CGGTGACGAT CGACTTTTTG CCCGATGCCG CGCCGGGCTG GCTGCTCGGA GCGAAGCGCG CGCGCCCGCG CGCGACGCTC GCTTCGGCGC TCGCGCTCCC CGACCGCCTT GCGCAGACGC TCGCCGACCG CCTTGCGCTC CCCGGCGAAC TCGGCGCCCA GACCGACCGC AAGCTCGCCG ACGCCGAAGC GCGCCTCAAA CGCTGGACTT TCCGCCCCAA CGGCACCGAA GGCTTCGCAA AGGCCGAGGT CACCGCCGGC GGCATTTCGA CCGCAAACCT GTCCTCGCAA ACAATGATGG CCAAATGCGT GCCGGGACTG TATGCGGTCG GCGAAGCCGT GGACGTCACC GGGTGGCTGG GCGGCTATAA TTTTCAATGG GCCTGGGCCA GCGGACACGC GGCGGGCCAG GCCCTTTAG
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Protein sequence | MGWRSQSCTD ACVAVFDYDA IVLGAGAAGL MCAAVAGQRG RRVLLLDHAD EVGKKILISG GGRCNFTNIY TRPETYISAN PHFAKSALAR YAPADFIALV ERHGIAYHEK TLGQLFCDGS AKQVVAMLLD ECARGGVDVR CGQPVRQVTH ADGRFAVRFG DLDFAAPNLV IATGGPSIPK MGASGFAYDL ARQFGLKVVE PRPALVPLTL GGDDVLFREL SGVATPVEAR AGKAAFREAA LFTHKGLSGP AILQVSSYWR HGEPVTIDFL PDAAPGWLLG AKRARPRATL ASALALPDRL AQTLADRLAL PGELGAQTDR KLADAEARLK RWTFRPNGTE GFAKAEVTAG GISTANLSSQ TMMAKCVPGL YAVGEAVDVT GWLGGYNFQW AWASGHAAGQ AL
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