Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1353 |
Symbol | |
ID | 4082821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1411338 |
End bp | 1412288 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638009719 |
Product | integrase catalytic subunit |
Protein accession | YP_616400 |
Protein GI | 103486839 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.4232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0729626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACAGA TTTTACACGG GAGCGCCAAG ACCACGCACG CCATTCGAGG CGAGCTACAG CGATCGCAAG CTTCGGTCGC GAGCCTCGCG AGGAAGTACG GGATCAACGA GAAGACCGTC TTGAAGTGGC GCCATCGGCA GTCTGTGGAC GACATGCCGA TGGGGCCGAA GGAGCGCCGC AGCACCGTCC TCTCGCCTAT GGAAGAAGCT GCCATCGTGG CGTTGCGGGT TCAGGCGCGG TTGCCGCTCG ACGACGTCTA CATCGCGCTA AAGGACGTGA TCCCGCAGTT GACGCGCTCG TCGCTGCATC GCTGCCTGCA ACGGCATGGC ATCAGCCGCC TGCCCAAAGC GGACCGCGAG AAGCCGAAGA AGTTCAAGGA TTATGAGATC GGCTACTTCC ACATCGACAT CGCCGAGCTA CGCTATGAGG GCGGCAAGGC CTTCCTCTAT GTGGCGGTGG ACCGCACCTC GAAGCTGGTC TTCGCCCGCA TCTATCGCAA GGCCACAAAG CTTGCCGCCG CAGCTTTCCT CAAGGTGCTG GTCAAGACCG TGCCTTACAG GATCCACACC GTGCTGACCG ACAATGGCGT CCAGTTCGTC CAGCCCCAGC GCGGCCAGAG CCGGCAATGG CTGATCCACA TCTTCGAGCG GGTCTGCCTC GAAAACGGCA TCGAGCATCG GCTGACCAAG CCCTACCACC CATGGACCAA TGGTCAAGCC GAGCGGATGG TCCGAACCAT CAAGGAAGCG ACCGTCAAAT CCTTCCATTA TGCCTCGATC CAGGAACTGC GACGACACGT CAGCGACTGG CTGATCGCCT ACAACTTCGC CAAGCAGCTC AAGGCTCTCA AGTTCAGGAC ACCATATGAA GCCATCGAGG AACTCTGGAA ATCAAAGCCC GATGTCTTTA TCGTCAAACC CAACCATCAC ATGCTGGGAC CAAACACCTA G
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Protein sequence | MGQILHGSAK TTHAIRGELQ RSQASVASLA RKYGINEKTV LKWRHRQSVD DMPMGPKERR STVLSPMEEA AIVALRVQAR LPLDDVYIAL KDVIPQLTRS SLHRCLQRHG ISRLPKADRE KPKKFKDYEI GYFHIDIAEL RYEGGKAFLY VAVDRTSKLV FARIYRKATK LAAAAFLKVL VKTVPYRIHT VLTDNGVQFV QPQRGQSRQW LIHIFERVCL ENGIEHRLTK PYHPWTNGQA ERMVRTIKEA TVKSFHYASI QELRRHVSDW LIAYNFAKQL KALKFRTPYE AIEELWKSKP DVFIVKPNHH MLGPNT
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