Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1068 |
Symbol | |
ID | 4082333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1100283 |
End bp | 1101599 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009429 |
Product | adenylosuccinate lyase |
Protein accession | YP_616118 |
Protein GI | 103486557 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0025797 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCCGC GTTATGCACG GCCGGAAATG ACGGCGATCT GGTCGGCGGA GAATCGCTTC TCCATCTGGT TCGAGATCGA AGCCCACGCG ACCGACGCGC TCGCCGAACT CGGCACCGTG CCCCCATCGG CGGCAAAGGC GCTGTGGGAC TGGTGGGCGA CCAGGCCTGC GATCGACGTC GCTGCAATCG ACGCGATCGA GGCCGTGACC AAGCATGACG TCATCGCCTT CCTTACCTGG GTTGCCGAAA ATGTCGGCGA GGAAGCGCGC TTCATGCACC AGGGCATGAC CAGCTCCGAC GTGCTCGACA CCTGCCTCGC GGTCCAGCTG GCGCAGGCCG CCGACATATT GCTCGCGGAC CTCGAGGCGC TGCTCGCCGC GATCAAGCGC CGCGCGTTCG AGCACAAGCT CACCCCGACG ATCGGGCGCA GCCACGGCAT CCACGCCGAG CCCGTCACCT TCGGGCTCAA GATGGCCGAA GCCTATGCCG AGTTTTCGCG TTGCAAGGCG CGGCTCCAGA CGGCGCGCGC CGAAATCGCG ACCTGTGCCA TTTCCGGCGC GGTCGGCACC TTCGCCAATA TCGATCCGCG CGTCGAAGCG CATGTCGCCG CCAAGCTGGG CCTGTCGATC GAGCCCGTCT CGACGCAGGT GATCCCGCGC GACCGTCACG CGATGTTCTT CGCGGTGCTC GGCGTGATCG CCTCGTCGAT CGAGCGGCTT GCGGTCGAGG TGCGCCACCT TCAGCGCACC GAAGTGCTGG AGGCAGAAGA GTATTTTTCG CCGGGCCAGA AAGGTTCGTC GGCGATGCCG CACAAGCGCA ATCCCGTGCT CACCGAGAAC CTCACCGGCC TTGCCCGCAT GGTGCGCAGC GCGGTCACGC CCGCGATGGA GAATGTCGCG CTGTGGCACG AACGCGACAT CAGCCATTCG TCGGTCGAAC GCTTCATCGG CCCCGACGCG ACGATCACGC TCGACTTCGC GCTCGCGCGC CTCACCGGGG TCATCGACAA GCTGCTCGTC TATCCCGACC GGATGCAGAA AAATCTCGAT CGCATGGGCG GGCTCGTTCA TTCGCAGCGG GTGCTGCTGG CGCTGACGCA GGCGGGCGCC AGCCGCGAAG ACAGCTATGC GCTCGTCCAG CGCAACGCGA TGAAAGTATG GGAAAGCGAC GGCCAGCTCT CGCTGCTCGA ACTGCTCAAG TCCGACGCCG ACGTCACCGC GCGCCTGTCG GCCGATCAAC TCACGGAACT TTTCGACCTC GACTATCATA TGAAGCATGT GGACACGATC TTCGACCGGG TGTTCGGCGC CGCCTAG
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Protein sequence | MVPRYARPEM TAIWSAENRF SIWFEIEAHA TDALAELGTV PPSAAKALWD WWATRPAIDV AAIDAIEAVT KHDVIAFLTW VAENVGEEAR FMHQGMTSSD VLDTCLAVQL AQAADILLAD LEALLAAIKR RAFEHKLTPT IGRSHGIHAE PVTFGLKMAE AYAEFSRCKA RLQTARAEIA TCAISGAVGT FANIDPRVEA HVAAKLGLSI EPVSTQVIPR DRHAMFFAVL GVIASSIERL AVEVRHLQRT EVLEAEEYFS PGQKGSSAMP HKRNPVLTEN LTGLARMVRS AVTPAMENVA LWHERDISHS SVERFIGPDA TITLDFALAR LTGVIDKLLV YPDRMQKNLD RMGGLVHSQR VLLALTQAGA SREDSYALVQ RNAMKVWESD GQLSLLELLK SDADVTARLS ADQLTELFDL DYHMKHVDTI FDRVFGAA
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