Gene Sala_0899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0899 
Symbol 
ID4082799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp907914 
End bp908309 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content64% 
IMG OID638009260 
Producthypothetical protein 
Protein accessionYP_615950 
Protein GI103486389 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.312493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCTC TTCCCGAACT CACACCCGAA AACACCGCCT TCTGGACCGG CGGCGCGCAG 
GGTGAATTGT TGATCGCGCG CTGCGACGAC TGCGATCATG CCATTCATCC GCCGCAGCTC
GTCTGCCCCA AATGCTGGGG CACGGCGGTA AAGAGCCGGG CCGTCCCCGG CACCGGTACG
GTCTACAGCT TTACCGTCAA CCACCAGCCC TGGGCGCCGG GAATGGCGGT GCCCTTTGCC
CTCGCGGTTG TCGATGTCGA TGAAGCGCCG GGCGTCCGTA TTACCGCTGA GGTGGTGAAC
GCACCCCCCG AAAGCGTCCA TATCGGCCAG CGGATGCGCG CGGTTTTCCA CGCGATCGAC
GACATCTGGT TCCCGCAGTG GGAGCCCGTC CAATGA
 
Protein sequence
MRPLPELTPE NTAFWTGGAQ GELLIARCDD CDHAIHPPQL VCPKCWGTAV KSRAVPGTGT 
VYSFTVNHQP WAPGMAVPFA LAVVDVDEAP GVRITAEVVN APPESVHIGQ RMRAVFHAID
DIWFPQWEPV Q