Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0662 |
Symbol | |
ID | 4082959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 673643 |
End bp | 674458 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638009021 |
Product | hypothetical protein |
Protein accession | YP_615716 |
Protein GI | 103486155 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00465467 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.1826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTGC GTTTCAAGCG CCCCCTTTCC ATCGCATTCG GTGCATTTGC GACGACGATG CTTTCCGGCT GCTATTATGG CGACGTCCAT GGCGCCAGCT ACGCTTCGCG CGGCGATTGC GCGGCGCGCT ACGGCGACGC TTATTATGAC TATGACGGCT ATGCCTATGA CGACGGCTAT GGCTATGATT GCTATGATGC GTCGGATTAT GGCAGCGGCT TTGTCCAGAT CGGCTTTGGC GGCGGCTGGT ACGACGATTA TTATTACCCC GGCCACGGGC TATGGATGTT CGACCGCTAT CGCAACCGCT ATCCGCTGCG CGACCATTAT CTGAACTATT GGGGCGGGCG GCGCGCTTGG TGGAAATATC ATGGCAAGCA CGGCGACTGG AAACCCGGTC GCCCCGGCTG GCATCGCGAC CGCGATGACG ACCGCGAGCG CGATGACCGG CGGCCGGGCT GGAACCGCGG CGACCGCGAC GGTGACGGCC CGCGCGGCAC GCGCCCGCGC CGCTCCACCG AAGCCATGAC CGGCACGCCG CGCGCGATCC GTAATCTGCC TGCCACCGAA CCGGGCGAGA TATATTCGCG GCCGCGCGGG CGGGTCGAGA CACGCGCGAC GCAACGCTCG CATCGGCAAT GGCCGCGGAG CGCCGTCGCC CCGCCCGCCG CGGCGCCGGT CACAGGGAGC ACGCCCCCTG TCGCGCGCCC AGCCGTTCGG CCGGCTCCGC CGCCGAGAGC GGACACGCCA TCGGCGCCCC CGCCCCCCGC GCGCGCCAAC CGCGTCGACC GGCCCAACAA AGTGCGCGAT CAATAG
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Protein sequence | MPLRFKRPLS IAFGAFATTM LSGCYYGDVH GASYASRGDC AARYGDAYYD YDGYAYDDGY GYDCYDASDY GSGFVQIGFG GGWYDDYYYP GHGLWMFDRY RNRYPLRDHY LNYWGGRRAW WKYHGKHGDW KPGRPGWHRD RDDDRERDDR RPGWNRGDRD GDGPRGTRPR RSTEAMTGTP RAIRNLPATE PGEIYSRPRG RVETRATQRS HRQWPRSAVA PPAAAPVTGS TPPVARPAVR PAPPPRADTP SAPPPPARAN RVDRPNKVRD Q
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