Gene Sala_0662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0662 
Symbol 
ID4082959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp673643 
End bp674458 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content68% 
IMG OID638009021 
Producthypothetical protein 
Protein accessionYP_615716 
Protein GI103486155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00465467 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.1826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGC GTTTCAAGCG CCCCCTTTCC ATCGCATTCG GTGCATTTGC GACGACGATG 
CTTTCCGGCT GCTATTATGG CGACGTCCAT GGCGCCAGCT ACGCTTCGCG CGGCGATTGC
GCGGCGCGCT ACGGCGACGC TTATTATGAC TATGACGGCT ATGCCTATGA CGACGGCTAT
GGCTATGATT GCTATGATGC GTCGGATTAT GGCAGCGGCT TTGTCCAGAT CGGCTTTGGC
GGCGGCTGGT ACGACGATTA TTATTACCCC GGCCACGGGC TATGGATGTT CGACCGCTAT
CGCAACCGCT ATCCGCTGCG CGACCATTAT CTGAACTATT GGGGCGGGCG GCGCGCTTGG
TGGAAATATC ATGGCAAGCA CGGCGACTGG AAACCCGGTC GCCCCGGCTG GCATCGCGAC
CGCGATGACG ACCGCGAGCG CGATGACCGG CGGCCGGGCT GGAACCGCGG CGACCGCGAC
GGTGACGGCC CGCGCGGCAC GCGCCCGCGC CGCTCCACCG AAGCCATGAC CGGCACGCCG
CGCGCGATCC GTAATCTGCC TGCCACCGAA CCGGGCGAGA TATATTCGCG GCCGCGCGGG
CGGGTCGAGA CACGCGCGAC GCAACGCTCG CATCGGCAAT GGCCGCGGAG CGCCGTCGCC
CCGCCCGCCG CGGCGCCGGT CACAGGGAGC ACGCCCCCTG TCGCGCGCCC AGCCGTTCGG
CCGGCTCCGC CGCCGAGAGC GGACACGCCA TCGGCGCCCC CGCCCCCCGC GCGCGCCAAC
CGCGTCGACC GGCCCAACAA AGTGCGCGAT CAATAG
 
Protein sequence
MPLRFKRPLS IAFGAFATTM LSGCYYGDVH GASYASRGDC AARYGDAYYD YDGYAYDDGY 
GYDCYDASDY GSGFVQIGFG GGWYDDYYYP GHGLWMFDRY RNRYPLRDHY LNYWGGRRAW
WKYHGKHGDW KPGRPGWHRD RDDDRERDDR RPGWNRGDRD GDGPRGTRPR RSTEAMTGTP
RAIRNLPATE PGEIYSRPRG RVETRATQRS HRQWPRSAVA PPAAAPVTGS TPPVARPAVR
PAPPPRADTP SAPPPPARAN RVDRPNKVRD Q