Gene SYO3AOP1_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1325 
Symbol 
ID6332677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1362788 
End bp1364224 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content34% 
IMG OID642657609 
Productglutamyl-tRNA synthetase 
Protein accessionYP_001931489 
Protein GI188997238 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGAG TTAGATTTGC ACCAAGTCCA ACAGGTTATT TACATCTTGG GAATGCAAGA 
ACAGCACTTT TTAATTACCT ATTTTCGAGA CATGAAAACG CTACTTTTAT ACTCAGGATT
GAAGATACGG ATTTAGAAAG GTCTAAAAAA GAATACGAAG AAATGCTTAT GGAAGATTTA
AAATGGATGG GGATTGAGTG GGACGAAGGT CCGGATGCGG GAGGTCCTCA CGGTCCATAC
AGACAATCAG AAAGATTAGA AATATACATG AAGTATGTTG ATAAGCTTTT AAAGTCAGGT
GATGCTTATT ACTGCTACTG TACAGAAGAG GAGTTAGAGC AGGAAAGAGA AAAAGCTATT
GCAGAAGGAA GACCTTACAG ATATAGCGGA AAATGCAGAA ATCTAACACC GGAAGAAAGA
GCCTTTTATG AAGGTAAGAG TATAAAACCG GTTATAAGAT TTAAAGTTCC GGATAAAACG
GTGGTATTTG AAGATATCAT TAGAGGCCAT GTAGAGATAG ATACAAAGGA ATTTGGAGAT
TTTGTGATTG TAAGACAAGA TGGCATGCCA GTTTATAACT TTGTAGTTGT TATAGATGAT
GCTTTAATGG GAATAACTCA CGTAATTAGA GGAGAAGACC ATTTATCAAA CACTCCAAAA
CAGATAGTAA TATATGAAGC TCTTGGTTTT GCGATTCCAC AATTTGCACA TCTGCCTATA
ATTCTTGGAG AAGATAGAAC AAAGCTATCA AAAAGACATG GGGCTGTATC TGTTAGAGCA
TTAAAAGATG ATGGATTTAT TTCAGAGGCA GTATTTAACT ATTTATCATT ACTTGGATGG
CATCCAAAAG AAGAAAAAGA GATTTTATCA AAAGAGGAGA TAATCAAGCA GTTTAGAATT
GAAGATGTGA ATAAATCTCC GGCAATATTT GACAGAACAA AACTAAGATG GATGAACGGT
GTATACATAA GAGAAATTCT TGATTTAGAC GACTTAACAA AAAGAGCTAT TCCCTTTTTT
GAAGGCTTTG GATACAAAGC TGACTATGAA TTTTACAAAA AAGTTATGTC TGCAATCAGA
GATAGCATCG AAACATTGAT GGAAATCAAA GAAAGGGCTA AAGTCTTCTT TGTTGATGAA
TTTCCATACA CAGAAGAGAT AGTTAATGAA GTAAAATCTG ATGAGAATGT TTATAAAGTT
GTAGAGATTT TTTATAACAA AATTAAAAAC CTATCAGCTA TTACAAAAGA AGATTTTAAA
AACATCACAA AAGAGATTCA AAAAGAGTAT GGCTACAAAG GAAAGGCTTT GTTCCATCCT
ATAAGAATCG CATTAACGGG AGAACCTTCC GGGGTTGGGC TTGATTTACT CGTTGAAGTT
ATAGGCATAG AAAGAGTCAA ATTTAGATTA GAAAGATTTT TAGAATACTT TGGATGA
 
Protein sequence
MKRVRFAPSP TGYLHLGNAR TALFNYLFSR HENATFILRI EDTDLERSKK EYEEMLMEDL 
KWMGIEWDEG PDAGGPHGPY RQSERLEIYM KYVDKLLKSG DAYYCYCTEE ELEQEREKAI
AEGRPYRYSG KCRNLTPEER AFYEGKSIKP VIRFKVPDKT VVFEDIIRGH VEIDTKEFGD
FVIVRQDGMP VYNFVVVIDD ALMGITHVIR GEDHLSNTPK QIVIYEALGF AIPQFAHLPI
ILGEDRTKLS KRHGAVSVRA LKDDGFISEA VFNYLSLLGW HPKEEKEILS KEEIIKQFRI
EDVNKSPAIF DRTKLRWMNG VYIREILDLD DLTKRAIPFF EGFGYKADYE FYKKVMSAIR
DSIETLMEIK ERAKVFFVDE FPYTEEIVNE VKSDENVYKV VEIFYNKIKN LSAITKEDFK
NITKEIQKEY GYKGKALFHP IRIALTGEPS GVGLDLLVEV IGIERVKFRL ERFLEYFG