Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1012 |
Symbol | |
ID | 6331239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1048433 |
End bp | 1048897 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642657300 |
Product | fimbrial protein |
Protein accession | YP_001931185 |
Protein GI | 188996934 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4968] Tfp pilus assembly protein PilE |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 7.8428e-16 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGAA TTTTTAAGTC AATTGCAGAA GCAATGTCTC TCACAGCAAA AATTGAAGGT GAGAGAAGAA AGGAAAAAGG TTTTACACTC ATTGAGTTGC TCATCGTTAT CGCTATCATT GCGATCCTTG CATCTATCGC TATTCCACAG TACATGAAGT ACCAAAGGAA AGCTAAAGTT AGCTCTTACG CAGAACCAAT AGCAAGGGCA TGTTTGATGG ACTTAGCTGC TTATTGCGTT GAGAATCCAA GTGCAACTTT GTCAATTGAT TCTACAATAG CTAAAAATTG TACAACAACA ACAGTTACAC CAGGGGGAAC AGTCAATCTT AATGGTGGCG GGTTTGTGTG TGATAATACA GGATCTATTA CAGCAGGTAG CGTTACTGCA ACACTTGGAA ATATAAGTGA TTATACTGCA TCATGTACTG TAATAAATAA CGGATTTAAG TGTACAGTTC AATAA
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Protein sequence | MERIFKSIAE AMSLTAKIEG ERRKEKGFTL IELLIVIAII AILASIAIPQ YMKYQRKAKV SSYAEPIARA CLMDLAAYCV ENPSATLSID STIAKNCTTT TVTPGGTVNL NGGGFVCDNT GSITAGSVTA TLGNISDYTA SCTVINNGFK CTVQ
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