Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1627 |
Symbol | |
ID | 4437727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1523378 |
End bp | 1524133 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639677220 |
Product | ABC-type uncharacterized transport system, permease component |
Protein accession | YP_820969 |
Protein GI | 116628350 |
COG category | [R] General function prediction only |
COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAG CAGTTAATAA TACGTCGCTA TTTTTGGCGG CAATGTTAGT GCTCGTCGCG TTAGGAATTA GTTTGTGGCA GAAACTTGGC TTGGATAGGG ACATCGTCAT TGGTGTCGTG CGGGCTGTTG TACAACTATT TATCGTGGGT TACTTGCTAA AGTATATTTT CCGAGTCAAC AATTTGTGGC TAACGCTGGC GATGATGGGC TTCATTATCT TCAATGCGGC TTGGAATGCG AAAAAACGGG GGCCGGGGAT TGACCATGCA TTAGCCATTT CGTTATTAGC CATTTTTGTT AGTACAGGGG TAACACTCGG CGTCCTCGTG CTATCTGGTG CGATTAAGTT TGTGCCATCG CAAATGATTC CCATTTCTGG TATGATTGCG TCGAATTCAA TGGTCGCAGT TGGGCTGGCT TATCGCAGCC TCAATAGCCA GTTTCATGAC CAGCGCCAAG GTGTGCTTGA ACGGTTGGCG TTAGGGGCTG GTCTACTTGA TGCTTCGATT GCCATCGTGC GTGAGGCGAT TCTTACGGGG ATGTCACCAA CCATTGATTC GGCAAAGACT GTGGGTCTAG TCAGTCTGCC AGGGATGATG TCCGGTTTGA TCTTTGCAGG GGTCAATCCA GTACGGGCCA TTAGGTATCA AATTATGGTC ACGTTCATGC TCTTATCAGC GACTAGTTTG GGGTCAATCA TTGCGTGCTA TTTAGCTTAC CGTAATTTCT ATAATGAACA AAAACAGTTG AAGTAA
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Protein sequence | MNLAVNNTSL FLAAMLVLVA LGISLWQKLG LDRDIVIGVV RAVVQLFIVG YLLKYIFRVN NLWLTLAMMG FIIFNAAWNA KKRGPGIDHA LAISLLAIFV STGVTLGVLV LSGAIKFVPS QMIPISGMIA SNSMVAVGLA YRSLNSQFHD QRQGVLERLA LGAGLLDASI AIVREAILTG MSPTIDSAKT VGLVSLPGMM SGLIFAGVNP VRAIRYQIMV TFMLLSATSL GSIIACYLAY RNFYNEQKQL K
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