| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0327 |
|---|
| Symbol | |
|---|
| ID | 4436943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 280878 |
|---|
| End bp | 281591 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639676060 |
|---|
| Product | urease accessory protein |
|---|
| Protein accession | YP_819827 |
|---|
| Protein GI | 116627208 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0830] Urease accessory protein UreF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATTA ATCCCTTTGC TAATGTATCT TTGCAAGATT ATCTTGAAAT TGTGCAAATT
GTCGATTCAA CCTTTCCAAT TGGATCATTT AACCACTCAT TTGGGATGGA AAATTATCTG
CGTGAAGACA CTGTAACAGA TGATAAAGGT TACGAAGAGT GGCAAGAAGC CTATTTAGCC
AGTCAGTTTA AATATGGTGA AGGTCTTGTA ATCAAACTGG TTTATGATGC TATGGTTACA
GATAACATAG ACCAGGTTTG GTATTATGAC AAGGTCTTGA CAGTTTCGAC GCAAGCGCGT
GAAACAAGAC AGGGGACTAA AATGATTGCT AAACAAATGC TTCGACTCAT TCAAAGGCTT
CATGCTATTC CGGTATTGGA TGACTATCAG TCTAAAATAC GTAAGGGTGT GGCCTTCGGC
AATCCAGCTA TTGTCTTTGC ACTCTATGTG TTTAACAAGG GCTTGGGATG TAATGAAGCC
ATAGCACTTT ATGGTTATAG CGTGATTTCG ACGATGGTTC AAAATGCTGT GCGTGCCATT
CCCCTTGGAC AGTTTGCTGG ACAGGAGATT GTTTTACGTA GCTTTTCGCA ATTAGAAAAA
ATGACACAAG AAATTCAAGA ATTGGATGCG TCCTACCTTG GGGCCAATAC GCCTGGTCTT
GAATTAGCTC AGATGAAACA TGAAACACAG GTATTTCGCC TATTCATGTC CTAA
|
|---|
| Protein sequence | MNINPFANVS LQDYLEIVQI VDSTFPIGSF NHSFGMENYL REDTVTDDKG YEEWQEAYLA
SQFKYGEGLV IKLVYDAMVT DNIDQVWYYD KVLTVSTQAR ETRQGTKMIA KQMLRLIQRL
HAIPVLDDYQ SKIRKGVAFG NPAIVFALYV FNKGLGCNEA IALYGYSVIS TMVQNAVRAI
PLGQFAGQEI VLRSFSQLEK MTQEIQELDA SYLGANTPGL ELAQMKHETQ VFRLFMS
|
|---|
| |