Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0249 |
Symbol | |
ID | 4436904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 212822 |
End bp | 214576 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639675993 |
Product | ribose/xylose/arabinose/galactoside ABC-type transporter permease |
Protein accession | YP_819761 |
Protein GI | 116627142 |
COG category | [R] General function prediction only |
COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component [COG4120] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT TCTTGGTCAG TATGATGGCT GTTATAACAG CTGCCATCTT GGTTGCATGC TCCAATGCTT CTAACAAAGA TTTAGTTCAC ATCGGTGTTC TCCAATATGT AGAGCATCCT TCCTTGTCAG CGACACGTAA AGGGTTCATT GAAGAACTCA AAGAGGAAGG GTATGTCGAT GGTAAGAACA TTAAAATCGA TTATCAGAAT GCACAAGGAG ATCAGTCTAA CTTGCAGACG ATTTCTCAGT CGCTTATTGA AGATAATGAT GTCATGTTGG CTATCGCAAC CCCAGCAGCT CAGTCATTAA GCAGTTTGAC AAAAGGTAAG CCAATTCTCT TTACGGCAGT GACGGATCCT GTCTCAGCTA AGTTGGTTAA GTCTATGGAC AATGTTGGTG GAAATGTGAC GGGGACAAGT GACATGTCTC CTATCAATAA ACAGGTTGAA TTGTTGAAAA AGGTCTTTCC AAACACTAAA AAAGTTGGGA TTATGTATAC GACCAGTGAG CGTAACTCAG AAGTTCAGGT TGAAGAAGCC AAGAAATACT TTAAGGAATC TGGTATTGAA ACGGTTATTA AGGGGATTTC ATCAACCAAC GATATTCAAG ATACAGCCAA AAGCTTGATG AGTCAGACCG AAGTCATTTT TATCCCGACT GACAATACCA TTGTTAGTGC CATTAATACC TTGGTAGACC TTTCTAAAGA GACTAAAGTT CCTGTTGTTG GTAGTGATGC TGGTAGTGTA GAAAAAGGTG TCCTATTCAC TTATGGAACC AACTATGAAG CACTTGGTCG TCAAACAGGT AAGTTAGCAG GTCGTGTTCT GCGAGGTGAG AAAGTTAAGG ACATTGATGC GGAGTACCCT AAAACTCTAA ATGTTGTGGT TAATCATGAT ATGGCTAAAG AACTTGGCAT TGATGTTTCT AGAATTAGTG ATGAGGAATC TAAAGTATCA ACGAAAGATG ACAAACCGAT TGCCAAAAAA GATAAGGGTG TCATTAAGCT TAAGGTGAAT AAGTCATCTA AGAATGGCTT TTCAAATGTG GTTCTAACAT CCATTTCTCA GGGACTTCTC TGGGCGATTA TGGCTATTGG GGTCTTCATT ACCTTCCGTA TTTTGGACCT TGCCGATTTG ACAGCTGAGG GAACCTTTCC ACTTGGTGCT GCAACGACAA CTATCATGAT TATCCGTGGT ATCAACCCAA TCTTTGCAAC TCTAGGTGGT TTTGTAGCTG GTATGTTTGC AGGTGCTGTG TCTGGCTTTA TGCATACGAA AATGAAGATA CCAGCACTAT TAACAGGGAT TATTACCCTA ACAGGGCTCT ATTCAGTTAA CCTTTTGGTT CTCGGAAGTG CCAATATCTC TCTTTCAGGA CATAATACGC TAGTGACTAT GGTGATGGGG CTTGGATTGT CTAAGCTGAG TGGTGTGATT CTATTAGGAC TAATCTTCGT TAGTCTTGTA GTGTTTATGT TGGTTGTTCT CCTTAATACA CAGGTTGGAC TTGCTCTTCG TGCAATAGGT GATAATCTTG CCATGGGAGA AGCTAATGGT ATCAAAGTTG ATCGTATGAA GATTCTTGGT TACATGATTT CCAATGGTTT GATTGCCCTA TCAGGTGCTC TCCTAGCTCA AAATAATGGC TATGCGGATA TGAATATGGG TACAGGTACA ATCGTAAATG GCTTGGCTGC AATCATCTTG GCTGAGGTTA TCGTTAAGTA TTTACCACTT GGCAAACGTC TTTGA
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Protein sequence | MKKFLVSMMA VITAAILVAC SNASNKDLVH IGVLQYVEHP SLSATRKGFI EELKEEGYVD GKNIKIDYQN AQGDQSNLQT ISQSLIEDND VMLAIATPAA QSLSSLTKGK PILFTAVTDP VSAKLVKSMD NVGGNVTGTS DMSPINKQVE LLKKVFPNTK KVGIMYTTSE RNSEVQVEEA KKYFKESGIE TVIKGISSTN DIQDTAKSLM SQTEVIFIPT DNTIVSAINT LVDLSKETKV PVVGSDAGSV EKGVLFTYGT NYEALGRQTG KLAGRVLRGE KVKDIDAEYP KTLNVVVNHD MAKELGIDVS RISDEESKVS TKDDKPIAKK DKGVIKLKVN KSSKNGFSNV VLTSISQGLL WAIMAIGVFI TFRILDLADL TAEGTFPLGA ATTTIMIIRG INPIFATLGG FVAGMFAGAV SGFMHTKMKI PALLTGIITL TGLYSVNLLV LGSANISLSG HNTLVTMVMG LGLSKLSGVI LLGLIFVSLV VFMLVVLLNT QVGLALRAIG DNLAMGEANG IKVDRMKILG YMISNGLIAL SGALLAQNNG YADMNMGTGT IVNGLAAIIL AEVIVKYLPL GKRL
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