Gene STER_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0249 
Symbol 
ID4436904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp212822 
End bp214576 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content41% 
IMG OID639675993 
Productribose/xylose/arabinose/galactoside ABC-type transporter permease 
Protein accessionYP_819761 
Protein GI116627142 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component
[COG4120] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT TCTTGGTCAG TATGATGGCT GTTATAACAG CTGCCATCTT GGTTGCATGC 
TCCAATGCTT CTAACAAAGA TTTAGTTCAC ATCGGTGTTC TCCAATATGT AGAGCATCCT
TCCTTGTCAG CGACACGTAA AGGGTTCATT GAAGAACTCA AAGAGGAAGG GTATGTCGAT
GGTAAGAACA TTAAAATCGA TTATCAGAAT GCACAAGGAG ATCAGTCTAA CTTGCAGACG
ATTTCTCAGT CGCTTATTGA AGATAATGAT GTCATGTTGG CTATCGCAAC CCCAGCAGCT
CAGTCATTAA GCAGTTTGAC AAAAGGTAAG CCAATTCTCT TTACGGCAGT GACGGATCCT
GTCTCAGCTA AGTTGGTTAA GTCTATGGAC AATGTTGGTG GAAATGTGAC GGGGACAAGT
GACATGTCTC CTATCAATAA ACAGGTTGAA TTGTTGAAAA AGGTCTTTCC AAACACTAAA
AAAGTTGGGA TTATGTATAC GACCAGTGAG CGTAACTCAG AAGTTCAGGT TGAAGAAGCC
AAGAAATACT TTAAGGAATC TGGTATTGAA ACGGTTATTA AGGGGATTTC ATCAACCAAC
GATATTCAAG ATACAGCCAA AAGCTTGATG AGTCAGACCG AAGTCATTTT TATCCCGACT
GACAATACCA TTGTTAGTGC CATTAATACC TTGGTAGACC TTTCTAAAGA GACTAAAGTT
CCTGTTGTTG GTAGTGATGC TGGTAGTGTA GAAAAAGGTG TCCTATTCAC TTATGGAACC
AACTATGAAG CACTTGGTCG TCAAACAGGT AAGTTAGCAG GTCGTGTTCT GCGAGGTGAG
AAAGTTAAGG ACATTGATGC GGAGTACCCT AAAACTCTAA ATGTTGTGGT TAATCATGAT
ATGGCTAAAG AACTTGGCAT TGATGTTTCT AGAATTAGTG ATGAGGAATC TAAAGTATCA
ACGAAAGATG ACAAACCGAT TGCCAAAAAA GATAAGGGTG TCATTAAGCT TAAGGTGAAT
AAGTCATCTA AGAATGGCTT TTCAAATGTG GTTCTAACAT CCATTTCTCA GGGACTTCTC
TGGGCGATTA TGGCTATTGG GGTCTTCATT ACCTTCCGTA TTTTGGACCT TGCCGATTTG
ACAGCTGAGG GAACCTTTCC ACTTGGTGCT GCAACGACAA CTATCATGAT TATCCGTGGT
ATCAACCCAA TCTTTGCAAC TCTAGGTGGT TTTGTAGCTG GTATGTTTGC AGGTGCTGTG
TCTGGCTTTA TGCATACGAA AATGAAGATA CCAGCACTAT TAACAGGGAT TATTACCCTA
ACAGGGCTCT ATTCAGTTAA CCTTTTGGTT CTCGGAAGTG CCAATATCTC TCTTTCAGGA
CATAATACGC TAGTGACTAT GGTGATGGGG CTTGGATTGT CTAAGCTGAG TGGTGTGATT
CTATTAGGAC TAATCTTCGT TAGTCTTGTA GTGTTTATGT TGGTTGTTCT CCTTAATACA
CAGGTTGGAC TTGCTCTTCG TGCAATAGGT GATAATCTTG CCATGGGAGA AGCTAATGGT
ATCAAAGTTG ATCGTATGAA GATTCTTGGT TACATGATTT CCAATGGTTT GATTGCCCTA
TCAGGTGCTC TCCTAGCTCA AAATAATGGC TATGCGGATA TGAATATGGG TACAGGTACA
ATCGTAAATG GCTTGGCTGC AATCATCTTG GCTGAGGTTA TCGTTAAGTA TTTACCACTT
GGCAAACGTC TTTGA
 
Protein sequence
MKKFLVSMMA VITAAILVAC SNASNKDLVH IGVLQYVEHP SLSATRKGFI EELKEEGYVD 
GKNIKIDYQN AQGDQSNLQT ISQSLIEDND VMLAIATPAA QSLSSLTKGK PILFTAVTDP
VSAKLVKSMD NVGGNVTGTS DMSPINKQVE LLKKVFPNTK KVGIMYTTSE RNSEVQVEEA
KKYFKESGIE TVIKGISSTN DIQDTAKSLM SQTEVIFIPT DNTIVSAINT LVDLSKETKV
PVVGSDAGSV EKGVLFTYGT NYEALGRQTG KLAGRVLRGE KVKDIDAEYP KTLNVVVNHD
MAKELGIDVS RISDEESKVS TKDDKPIAKK DKGVIKLKVN KSSKNGFSNV VLTSISQGLL
WAIMAIGVFI TFRILDLADL TAEGTFPLGA ATTTIMIIRG INPIFATLGG FVAGMFAGAV
SGFMHTKMKI PALLTGIITL TGLYSVNLLV LGSANISLSG HNTLVTMVMG LGLSKLSGVI
LLGLIFVSLV VFMLVVLLNT QVGLALRAIG DNLAMGEANG IKVDRMKILG YMISNGLIAL
SGALLAQNNG YADMNMGTGT IVNGLAAIIL AEVIVKYLPL GKRL