| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0048 |
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| Symbol | |
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| ID | 1172471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | - |
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| Start bp | 35916 |
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| End bp | 37844 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637346507 |
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| Product | prolyl oligopeptidase family protein |
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| Protein accession | NP_720384 |
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| Protein GI | 24376276 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.436282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC ATTTATTTTA TAAAGAAGTT ATTGTGATAT TAAAAGTATT ATTGATTTCT
ATATTTTTCA GTTTTTCCAT CCAAGCGGTG ACTATTAATG ATTTTTCCCG TCATCCTGAG
TTTTATGATG TAAAAATATC ACCGGATGGG AAATACCTTG CCACATTAGT TAATACTGAA
GGCCGTAAAA CTTTAGCATT TTTAGATAGT GACACTTTTA AGGTCATTTT TGCGCTGGGT
GGAGACAAGC GCGATCAAGT TGCAGATTAC TACTGGGTCA ACAATGAACG AGTGATTGTG
CAGGTTGAAC AGGTTAGAGG CTCATTAGAA AAACCATTAA ATTATGGTGA AATCTATGCT
GTCAATTTTG ATGGTAAGAA AGGAGCAATG ATCTATGGTT ACCGAGCCAA AACACCGACA
AGCAATGGCG GTTTTTTAGT TGATAACCTG AAAGGGGATG ATCAACATGT GTTAATCCGC
TCTCAAGCTT TAAGTCGACG TACGGATGTG ATTCCAGAAA TTGTAAAGCT CAATATATAT
TCAGGAAAAA CCCGTCGAAT CAAGCGTGCG CCTTTAGCTT ATAGTCAGTT TTTAATCGAT
CATGCTGGAG TCCCGCGTTT TGTTGCAGGG ACTGATGATA AATTTACTAC GCAACTTTAC
TATAGCAAAG GGCAAGGCGA TGATTGGCAA CTCTTTGGTG ATAAATTTGC AGGGGCATTT
GAGCCAATCG CTTTTGCTGC GGATAATCAA AGTATTTATG CCTTAAAGAG CACAGATGAT
GGACCAAAAG GCTTATATCA CTATGATTTA TCGACTAAAA AAGAAACTAA GTTATATCAA
AGTGAGATGG TTGATCCAAC TTATGCTATC GGTAGTCAAT TGAATGAGGT ATATGGATTA
CGGATAGATG AAGATTATCC TAATTACCTT TATCTCAAAC CTGACTCAGT CGACGCTAAG
CTACACAAGT CCTTAGTCGA TGCTTTTAAT GGTGATAGCG TACTGGTTAG CAGTATCACT
GAGGATGGTA AACAGGCTAT TGTGCATGTG AGTAGTGATC GCAATCCAGG TGATTTTTAT
CTTTTTGATA CCACTCAAAT GAAAGCGCGC TTTTTAATGA GCAGTAGAGG CTGGATAAAT
GCCAAGGAAA TGGCAGAAAC AGAACCTTTT AGAATCAAAA CAAAGGATGG TTTTACCTTA
AATGGATTGA TGACTTTGCC TAAAGATAAA AAAACAAATT TACCTACAGT TATCTTGCCC
CATGGTGGCC CACACGCTCG TGATTATTGG GGATTCGACC CATTAGTGCA AATGCTGGCT
AATCAAGGTT TTGCTGTGGT GCAAGTGAAC TTTAGGGGCT CAACCGGTTA TGGTAAAAAC
TTTGAAGAAG CGGGTTATGG AAAATGGGGC ACTAAAATTC AAGACGATAT AATGCTGGCA
ACACAATATG CCATACAACA AGGTATTGCA GATGAAAATC GGATGTGTAT TTTAGGTATT
AGTTTTGGTG GATATAGTGC TTTGCAGAGT GCGACTCGCT ACCCTGATAC CTTTAAATGT
GCAATTGGTT ATGCTGGGGT TTACGATTTA GAAATGTTAT ATAACGAAGG CGATGTGAAA
GATACCAGTT GGGGTGATGC TTATTTAGAT AAAACTCTCG GTACAGATAA AGCGGCATTA
AAATCTCAAT CCCCTGTGCA TTTTGTCGAT ATGCTTAAGG CCTCAGTACT CATTATCCAT
GGCGAAGAAG ATAAAAGAGC GTCTATTGAG CACGCTAACG CTTTAATGAA GGCATTAGAT
AAAGCAAATA TCCCTTATGA GAAACTTATA AAAGACAAAG AAGGTCACGG ATTTTATAAG
CAAGAAAATA TAGGTGAGGC CAATAAGAAA ATAGTTGATT TTTTAAATCG GAAAATTGGA
TTTAAGTAA
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| Protein sequence | MKIHLFYKEV IVILKVLLIS IFFSFSIQAV TINDFSRHPE FYDVKISPDG KYLATLVNTE
GRKTLAFLDS DTFKVIFALG GDKRDQVADY YWVNNERVIV QVEQVRGSLE KPLNYGEIYA
VNFDGKKGAM IYGYRAKTPT SNGGFLVDNL KGDDQHVLIR SQALSRRTDV IPEIVKLNIY
SGKTRRIKRA PLAYSQFLID HAGVPRFVAG TDDKFTTQLY YSKGQGDDWQ LFGDKFAGAF
EPIAFAADNQ SIYALKSTDD GPKGLYHYDL STKKETKLYQ SEMVDPTYAI GSQLNEVYGL
RIDEDYPNYL YLKPDSVDAK LHKSLVDAFN GDSVLVSSIT EDGKQAIVHV SSDRNPGDFY
LFDTTQMKAR FLMSSRGWIN AKEMAETEPF RIKTKDGFTL NGLMTLPKDK KTNLPTVILP
HGGPHARDYW GFDPLVQMLA NQGFAVVQVN FRGSTGYGKN FEEAGYGKWG TKIQDDIMLA
TQYAIQQGIA DENRMCILGI SFGGYSALQS ATRYPDTFKC AIGYAGVYDL EMLYNEGDVK
DTSWGDAYLD KTLGTDKAAL KSQSPVHFVD MLKASVLIIH GEEDKRASIE HANALMKALD
KANIPYEKLI KDKEGHGFYK QENIGEANKK IVDFLNRKIG FK
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