| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4136 |
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| Symbol | |
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| ID | 1171746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4292681 |
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| End bp | 4293856 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637345865 |
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| Product | decarboxylase, pyridoxal-dependent |
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| Protein accession | NP_719665 |
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| Protein GI | 24375622 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAT TTCAATCTAT TGATGTTGCT GATTATTATG ATGCTCAAAC CTTCAAGCGT
ATCGAAGAGT TTGCCAAGGA TAAAGCGACT CCATTCGTAG TGATTGATAC CAGTATCATT
GCGAAACAAT ACGATGACAT GGTTAATAGT TTTCCTTATG CCGATGTTTA TTATGCAGTT
AAGGCGAACC CTGCGGCGGA GATCCTCACG TTACTCAAAG ACAAAGGGTC AAACTTTGAT
ATTGCCTCGA TTTATGAGCT AGATATGGTC ATGAATGTCG GGGTTACAGC TGACCGAGTG
AGCTATGGCA ATACCATTAA AAAGCGCCAA GATGTGCGGG CTTTTTATGA ACGTGGCGTG
CGTATGTATG CATCAGATTC TGAAGCCGAT CTGCGAATGA TCGCTGAGGA AGCACCGGGT
TCTCGTATCT ATGTGCGTAT TTTGACTGAA GGTACAGACA CTGCTGATTG GCCGTTATCG
CGCAAATTTG GTTGCCAAAA CGAGATGGCC TACGAGTTAT TAGTGTTGGC GAATGAATTA
GGCTTAGAAC CTTATGGAAT TTCGTTCCAT GTCGGTTCAC AGCAGCGTGA TATCGGTGCG
TGGGACTCTG CGATAGGTAA AGTGAAGAGC ATCTTCGACC GTTTACGTGA TGAGCATAAT
ATCGTCCTGA AGATGATCAA CATGGGTGGC GGCTTCCCTG CTAACTATAT TGATAAAACC
AATCAATTGG GTGTGTATGC TGAGCAAATC ACTCACTTCC TGAAGGAAGA TTTTGGTGAT
GACTTGCCAC AAATTATTCT GGAGCCGGGC CGTTCGCTAA TCTCTAATGC TGGAGTATTG
GTGTCTGAAG TGGTGCTAAT CAGTAAAAAA TCTTACACCG CATTAGAGCG TTGGGTGTTT
ACCGATGTGG GTAAATTCTC TGGGTTAATT GAAACGATGG ATGAGGCGAT TAAATTCCCA
ATCTTCACCC ATAAACAGGG TGAGTTGGAG AAATGTGTTA TCGCTGGCCC AACCTGCGAT
AGCGCCGACA TCATGTACGA ACACTACAGC TATGGTCTGC CGAATGATTT AGCGATTGGA
GATCGTATGT ATTGGTTAAC TGCCGGCGCG TATACTACGA CCTATTCGGC AGTGTGTTTT
AATGGTTTTC CGCCACTGAA AGATTACTAT CTGTAA
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| Protein sequence | MSQFQSIDVA DYYDAQTFKR IEEFAKDKAT PFVVIDTSII AKQYDDMVNS FPYADVYYAV
KANPAAEILT LLKDKGSNFD IASIYELDMV MNVGVTADRV SYGNTIKKRQ DVRAFYERGV
RMYASDSEAD LRMIAEEAPG SRIYVRILTE GTDTADWPLS RKFGCQNEMA YELLVLANEL
GLEPYGISFH VGSQQRDIGA WDSAIGKVKS IFDRLRDEHN IVLKMINMGG GFPANYIDKT
NQLGVYAEQI THFLKEDFGD DLPQIILEPG RSLISNAGVL VSEVVLISKK SYTALERWVF
TDVGKFSGLI ETMDEAIKFP IFTHKQGELE KCVIAGPTCD SADIMYEHYS YGLPNDLAIG
DRMYWLTAGA YTTTYSAVCF NGFPPLKDYY L
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