| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3706 |
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| Symbol | |
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| ID | 1171361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3855323 |
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| End bp | 3856591 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637345489 |
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| Product | NupC family protein |
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| Protein accession | NP_719246 |
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| Protein GI | 24375203 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAATCT TAGTTAGCCT CTTAGGCATC ATCACCTTAC TTGCTGTGGC ATACCTTGCC
TCTGAAAACC GTAGAGCCAT TAACTACCGC ACTGTCGGCC TCGCCTTTTT ACTACAATTG
GCCCTAGGGG CATTTGTAAT GTACTCCGCG CTGGGACAAT CGATGATATT CTCGATGGCT
GCTGCCGTCT CCAACGTCAT CAGCTACAGC AATGACGGCA TGTCTTTTAT GTTTGGCGGC
CTTGTCAGTG ATAAAATGTA TGAGCTATTT GGCGCAGGCG GTTTTGTCAT CGCTTTTAAA
GTGCTGCCAA TTATTGTGTT TTTCTCAGCA TTGTCGGCGG TGCTCTATTA TCTGGGAATA
ATGCAACTGG TGGTCAAAGC CGTTGGCGGG GCGCTGCAAA AACTGCTCAA CACCAGTAAG
GCAGAATCCA TGTCGGCCAG TGCCAACATC TTTTTAGGGG TAACAGAAGC GCCACTACTC
ATTAAACCTT ATATGCCGCG TATGACTCGC TCAGAGTTAT TTGCAGTAAT GTGCGGCGGT
TTAGCCTCAA TCGCGGGCAC TATGCTCGCG GGCTATGCTC AACTAGGCAT AAAGATGGAG
TACCTGCTCG CGGCCTCGTT TATGGCAGCT CCCGGCGGCC TTCTGTTTGC TAAGCTTTTG
ATCCCACAAA CAGAAACAAT CAACGATGCG CATCTACAGC TCACAGAGGA AAATCAACCT
CGCAATCTAC TTGATGCCGC CACCACAGGC ACCATGAGCG GACTTTCCCT CGCCCTCGCG
GTAGGCGCAA TGTTGTTTTC ATTTATCAGT TTAGTTGCCT TATTCAATGG GATGCTCGGT
GGTATTGGCG CTTGGTTTGG CCTCGAGGGT CTCACTTTGC AACAGATCCT CGGCTACCTG
TTTGCACCAC TGGCTTGGTT AATGGGCATT TCTTGGAATG AAGCCATGCT GGCGGGCTCT
TTTATTGGCC AAAAGATTGT GATCAATGAA TTTTTTGCCT ACATCAACTT AGCACCTTAC
CTGTCAGGTG ACGCCCTAGT CGCAACCACA GGGCAACCAA TGTCTGAGCG TACTCAAGTG
ATCTTATCTT TTGCGCTGTG TGGTTTTGCC AATATAGGTA CTGTGGCTAT CGCAATTGCT
GGGATCGGTG GCCTAGTGCC AGAGCGCCGC GCTGAAATCG CCTCACTTGG CCTAAAGGCC
TTGGCGGCGG GGATTTTATC TAATCTTATG GCGGCGACTA TCGCGGGATT ATTTATGAGC
TTAAGCTAA
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| Protein sequence | MQILVSLLGI ITLLAVAYLA SENRRAINYR TVGLAFLLQL ALGAFVMYSA LGQSMIFSMA
AAVSNVISYS NDGMSFMFGG LVSDKMYELF GAGGFVIAFK VLPIIVFFSA LSAVLYYLGI
MQLVVKAVGG ALQKLLNTSK AESMSASANI FLGVTEAPLL IKPYMPRMTR SELFAVMCGG
LASIAGTMLA GYAQLGIKME YLLAASFMAA PGGLLFAKLL IPQTETINDA HLQLTEENQP
RNLLDAATTG TMSGLSLALA VGAMLFSFIS LVALFNGMLG GIGAWFGLEG LTLQQILGYL
FAPLAWLMGI SWNEAMLAGS FIGQKIVINE FFAYINLAPY LSGDALVATT GQPMSERTQV
ILSFALCGFA NIGTVAIAIA GIGGLVPERR AEIASLGLKA LAAGILSNLM AATIAGLFMS
LS
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