Gene SO_3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3146 
Symbol 
ID1170840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3282739 
End bp3283131 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content43% 
IMG OID637344963 
ProductH-NS family DNA-binding protein 
Protein accessionNP_718702 
Protein GI24374659 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAT TTTTAGAAAT ATTAACTCAC GGTCGTCGTT TTAAAGCTGC TGTAAAAGAT 
CTCAGCGTTG AAGAACTGCG TGATTTAGCG GCTAAGCTAG ATAAAATCTT AGTTGAGCGT
GAGTCAATGG AAGCAGAAGA GCTGCAAGCT ATTGCAGCTC GTAATGCCAA GATTGAAGAA
ATCCGTCAAC AAATGGAAGC TGTTGGTTTA TCAATCGACG ACTTAGGCGG TGTTGCGGTT
AAAGCTTCGA GCAAAAAACG CGCTCCTCGT CCAGCGAAAT ACCAAATTGA AGTTGACGGC
GAAGTGATCC AGTGGACTGG TCAAGGTCGT ATGCCAACGG TATTTAAGAA CGAAGTCAAT
AAAGGCCGTT CTATGGATGA TTTCTTAATC TAA
 
Protein sequence
MSEFLEILTH GRRFKAAVKD LSVEELRDLA AKLDKILVER ESMEAEELQA IAARNAKIEE 
IRQQMEAVGL SIDDLGGVAV KASSKKRAPR PAKYQIEVDG EVIQWTGQGR MPTVFKNEVN
KGRSMDDFLI