Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1639 |
Symbol | lpxD |
ID | 1169433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1721984 |
End bp | 1723009 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637343547 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | NP_717250 |
Protein GI | 24373207 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGTG TGACTTTAAA AGAGTTAAGC CTGTTATTAG ATGGCGTTGT TCAGGGCGAT GAAACCTTAG TGATCAACAG CGTTGCAACG CTTGAACATG CCACATCGGG ACAAATCTCT TTTTTAGCCA ACAGCAAATA CCGTGCTCAG CTTGAATCAA CTCAAGCGAG CGCGGTGTTA TTGTCGGCTA AAGATGCGCA GGATTATCAA GGTACTGCGT TAGTTGTTAA AGACCCCTAT GTGGGGTTTG CCCGTGTGGC ACAGCTTTTA GATACCACAC CTAAGGCGGC TATGGGTATC CATCCGTCGG CGCAAATCGA CCCTTCTGCC CAACTGGGAG ACGGGGTTGC GATTGGTGCT AATGCGGTGA TTGGTGCTAA TGTTATTCTC GGTGAAAATG TGCAAATTGG CGCGGGCACT GTGATTGGAC AAGACTCCAT CATAGGTTCT AACACCCGTC TATGGGCCAA TGTCACCCTG TATCATAATG TTCACTTAGG CCAAGATTGT ATTATTCATT CTGGCGCCAT TATTGGCTCC GATGGTTTTG GTTATGCCAA TGAGCGTGGA CAATGGATTA AGATCCCCCA AACCGGCGGG GTGCGTATTG GTGATAGAGT CGAAATTGGT GCCAATTCAA CCATTGATCG CGGTGCATTG GGTCATACCG AGATCCACAA TGGCGTGATC ATTGACAACC AAGTGCAGGT CGCCCATAAC GATATCATTG GGGAAAATAC CGCCATCGCT GGCAGTACCA CGATAGCGGG CAGCGTGACG ATTGGTAAGC ATTGTATTAT TGGCGGCAAC TGCGCGATTG CAGGCCATTT AACGATTGCC GATGGTGTGC ATCTTTCTGG CGCGACCAAT GTTACCGGCA ATATGCGTGA GCCGGGGTTA TATTCATCTG CGACAGTGGC GATGGATAAT AACTTGTGGC GTAAAAACAC AGTTCGGTTC CGTCAATTGG ACGAGCTGTT CCAGCGCGTG AAGGCGATCG AAAAGAATTT AAATACACCA GAGTAA
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Protein sequence | MKSVTLKELS LLLDGVVQGD ETLVINSVAT LEHATSGQIS FLANSKYRAQ LESTQASAVL LSAKDAQDYQ GTALVVKDPY VGFARVAQLL DTTPKAAMGI HPSAQIDPSA QLGDGVAIGA NAVIGANVIL GENVQIGAGT VIGQDSIIGS NTRLWANVTL YHNVHLGQDC IIHSGAIIGS DGFGYANERG QWIKIPQTGG VRIGDRVEIG ANSTIDRGAL GHTEIHNGVI IDNQVQVAHN DIIGENTAIA GSTTIAGSVT IGKHCIIGGN CAIAGHLTIA DGVHLSGATN VTGNMREPGL YSSATVAMDN NLWRKNTVRF RQLDELFQRV KAIEKNLNTP E
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