Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1336 |
Symbol | nhaA |
ID | 1169157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1393979 |
End bp | 1395148 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637343280 |
Product | pH-dependent sodium/proton antiporter |
Protein accession | NP_716956 |
Protein GI | 24372914 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3004] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAG CAATTAGAAA TTTTTTGAGC CAAGAGTCGG CAGGTGGCAT CCTCTTATTA ATTGCCGTGG CCTTTGCCAT GTTAATGGCG AATTCTCCTC TGGCTGGATT CTATCAAGGT TTTCTCGGTA CTGAAGTTCA AGTACGAGTT GGCGCGCTCG ATCTGCATAA GCCATTGTTG TTGTGGATTA ACGATGGTTT GATGGCATTG TTTTTCTTGC TGATTGGTTT AGAAGTTAAA CGTGAGCTAT TGGAAGGGGC ACTATCGAGT GTGGCTCAGG CCTCATTGCC AACCTTCGCA GCCATTGGTG GCATGTTAGT GCCAGCGGGT ATTTACCTGT TATTTAACTA TGGCGATCCT ATCACACAAG CAGGTTGGGC AATCCCAGCT GCGACAGATA TTGCTTTTGC TTTGGGGATC ATGGCTTTAC TGGGTAGCCG CGTGCCTGTG GCGTTAAAGG TTTTCCTGCT GGCGTTAGCC ATCATTGACG ATTTAGGCGT TATTGTGATT ATCGCGCTTT TCTACAGCAG TGATCTATCA ACCGTTAGCT TAATTATTGC CAGCATTGCG ATTGTTGGTT TGGTTGCCTT AAACCGCAAG GGCGTGACCT CATTAGCCCC TTATGGAGTA CTCGGACTAA TTCTGTGGGT GGCTGTACTT AAGTCTGGTG TGCATGCCAC ATTAGCGGGT GTCATTATTG CTTTCTGTAT TCCTCTGCGA GCAAAAGATG GCAGTTCGCC TTCTGAGCAT TTAGAGCATA GTTTGCATCC TTGGAGCACT TTCCTGATCC TGCCAGTGTT CGCCTTCGCC AATGCTGGGG TCGCTTTAGG AAACATGAGT TTAGATACGC TAATGTCCCC TGTACCAGTG GGGATTGCAT TGGGACTCAT GCTAGGTAAG CCGATTGGTG TGATGTTGTT TAGTTTTGTC GCCGTCAAAC TTAAGTTAGC ACAATTGCCT GATGGTATTG GTTGGAAACA AATTGCGCCA GTGGCAGCGA TGTGTGGTAT CGGTTTTACC ATGTCAATGT TTATTGCTTC GTTGGCATTT GAGCAGGCAG ACCCTATGTT TGGTGATTTA GCACGCCTAG GCACCTTAAT GGGCTCAATT TTTGCGGCCT TAATCGGGTA TTTCTGGTTA TCAAAAGTGT TACCTAAAAA AGGAGTATAA
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Protein sequence | MEKAIRNFLS QESAGGILLL IAVAFAMLMA NSPLAGFYQG FLGTEVQVRV GALDLHKPLL LWINDGLMAL FFLLIGLEVK RELLEGALSS VAQASLPTFA AIGGMLVPAG IYLLFNYGDP ITQAGWAIPA ATDIAFALGI MALLGSRVPV ALKVFLLALA IIDDLGVIVI IALFYSSDLS TVSLIIASIA IVGLVALNRK GVTSLAPYGV LGLILWVAVL KSGVHATLAG VIIAFCIPLR AKDGSSPSEH LEHSLHPWST FLILPVFAFA NAGVALGNMS LDTLMSPVPV GIALGLMLGK PIGVMLFSFV AVKLKLAQLP DGIGWKQIAP VAAMCGIGFT MSMFIASLAF EQADPMFGDL ARLGTLMGSI FAALIGYFWL SKVLPKKGV
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