Gene SO_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1185 
Symbol 
ID1169014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1228241 
End bp1229332 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content48% 
IMG OID637343132 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionNP_716810 
Protein GI24372768 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTTA AATGCGGCAT TGTTGGTCTT CCTAACGTAG GTAAATCAAC GCTTTTTAAT 
GCGTTAACTA AGGCTGGCAT CGAAGCGGCA AACTTCCCGT TTTGTACCAT CGAGCCAAAC 
ACTGGCGTTG TACCTGTGCC GGATCCACGC TTAGACGCGC TGGCGGCGAT TGTTAATCCT 
CAGCGTGTAT TGCCTACTAC CATGGAGTTC GTGGATATCG CAGGCCTTGT TGCTGGCGCT 
TCTAAAGGTG AAGGTTTAGG TAACAAGTTC CTTGCTAACA TCCGTGAGAC GGATGCGATT 
GGCCATGTGG TACGTTGTTT TGACGATGAC AACATTGTTC ACGTTGCAAA CAAAGTGGAT 
CCTGCTCGTG ATATCGAAGT GATCAACACC GAACTGGCTC TCGCCGACTT AGATAGTTTA 
GAGCGCGCCG TTATTCGTCA GCAAAAACGC GCTAAGGGTG GCGATAAAGA CGCTAAGTTT 
GAGGTAGAAG TCCTTGAGAA AATGCGTCCA GTGCTCGATG AAGCCAAAAT GCTGCGCTCG 
ATGGATCTTT CTAAGGAAGA ATTAGAAGCC GTTGCTTACT TAAACTTCTT AACCTTAAAG 
CCAACCATGT ATATTGCTAA CGTGGCCGAA GATGGTTTCG ACAATAACCC ACACTTAGAT 
GCAGTGCGTG CAATTGCTGA AAAAGAAAAT GCCATTGTGG TTTCAGTGTG CGCAGCGATT 
GAATCAGAAT TGGCTGAAAT GGACGCTGAA GAACGCGATG AGTTTATGGC AGACCTCGGG 
TTAGAAGAGC CAGGTTTAGA TCGCGTGATC CGTGCGGGTT ATCAGTTATT GAGCCTGCAA 
ACTTATTTCA CCGCGGGTGT AAAAGAAGTG CGTGCTTGGA CTGTCTCTGT CGGTGCAACA 
GCGCCACAGG CGGCGGGCGT TATCCATACT GACTTCGAAC GTGGCTTTAT TCGTGCGCAA 
GTGGTGGCAT TTGACGACTT TATTGCTTAC AAAGGTGAAG CGGGCGCTAA AGAGGCGGGT 
AAATTACGTG TTGAAGGCAA GACTTATATC GTTCAAGACG GCGATGTCAT GCACTTCTTG 
TTTAACGTAT AA
 
Protein sequence
MGFKCGIVGL PNVGKSTLFN ALTKAGIEAA NFPFCTIEPN TGVVPVPDPR LDALAAIVNP 
QRVLPTTMEF VDIAGLVAGA SKGEGLGNKF LANIRETDAI GHVVRCFDDD NIVHVANKVD 
PARDIEVINT ELALADLDSL ERAVIRQQKR AKGGDKDAKF EVEVLEKMRP VLDEAKMLRS 
MDLSKEELEA VAYLNFLTLK PTMYIANVAE DGFDNNPHLD AVRAIAEKEN AIVVSVCAAI 
ESELAEMDAE ERDEFMADLG LEEPGLDRVI RAGYQLLSLQ TYFTAGVKEV RAWTVSVGAT 
APQAAGVIHT DFERGFIRAQ VVAFDDFIAY KGEAGAKEAG KLRVEGKTYI VQDGDVMHFL 
FNV