| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0028 |
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| Symbol | trkH-2 |
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| ID | 1167926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 32252 |
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| End bp | 33694 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637342037 |
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| Product | potassium uptake protein TrkH |
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| Protein accession | NP_715670 |
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| Protein GI | 24371628 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACT TTCGAGCGCT GTTATTTATT TTAGGGCTGT TTCTGTCAAT GCTGACAGCC
TTTATGTTTG CCCCGATGCT AGTCGCTGTA GTTAATGGCG AGGAAACCGT CGGCTCATTT
ATGTTATCGG CTTTAGCAAC TGGGATTTGT GCTAGCCTCT GTTTGCATAA CGGCCAAAGC
AAAGGCATAA ACCTCAATAT TCGCGATATG TTTCTGCTCA CCAGTCTCAC CTGGTTAATC
GTAAGCCTGT TCGCTGCCAT GCCTTTTACC CTATACCACG GTATTGGTTA TACCGATGCA
TTTTTCGAGA CCATGTCAGG AATTACCACC ACAGGCTCTA CCGTGCTTGT GGGGCTTGAT
ACCATGGATC ACAGCATCTT AATCTGGCGT TCGTTATTGC AGTGGCTTGG TGGGATTGGT
TTTATCGTAA TGGCGGTAGC GATTCTGCCC TTCTTAAACG TTGGTGGCAT GCGCCTGTTT
CGTACTGAGT CATCGGACTG GAGTGATAAG GCGGTTCCTC GCACACAAAG CATGGCCAAG
CATCTATTTT TTATCTATAT ATTGCTAACG ATCATTTGCA GTGTGGCCTA CCATCTTGCA
GGCATGACGT GGTTCCAAGC CATCAACCAC GCAATGACAA CTCTCTCGAC CGGTGGTTAC
TCGACTTCTG ATAGCTCAAT GGCGGCGTTT TCCAATTCGG CCCACTGGGT TGGTGTTGTC
TTTATGGCAG CAGGTGGTTT GCCACTGCTG ATGTTTGTGC AGATGATCCA ACAGCGCGAT
GTAAAAGTGT GGAACGATGC GCAAGTCAAA GGCTTCTTGT TTTTCCTCAC GTTTGTTTCT
TGCTCTATTG GTTTCTGGTT GTGGCAAACC CGTGATATAG CCCTAATTGA TGCGCTGCGC
TTATCCAGCT TTAACGTTGT ATCTGTGGTC ACTACAACCG GTTATGGTTT AACAGACTAT
GGCGCTTGGG GCGCCTTTGC CAACATTGCC TTTCTGTTCT TAATGTTTGT GGGTAGCTGC
TCGGGGTCGA CTTCGGGCGG AATAAAAATC TTCCGCTTTC AAATTGCGGG CGCGATTATG
CGCGAACAAT TAAAACAGCA ATGTCATCCC AACGGGATTT TTAGGGAGCG CTATAACAAC
CGACTCATAA CTGAAGATAT TGTGCGCTCG CTGATCACCT TTGTGCTGCT ATATATGTTC
GTAATTGTTG GGTTATCTGT GATTCTGGTA CTAACGGGTC TAGACCCAGT AACTAGCTTT
ACTGGTGCAA TTACCGCCGT GTCCAACGTG GGGCCAGGGC TTGGGCCGAT TATTGGTCCT
GTAGGTAACT TCTCCACCCT GCCCGATCTT GCTAAGTGGG CGCTCTCTTT AGGTATGTTG
CTTGGCCGCT TAGAAATTTT AACCGTAGCA GTACTGTTCC ATCCCAGTTT TTGGAAGTAC
TAA
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| Protein sequence | MLNFRALLFI LGLFLSMLTA FMFAPMLVAV VNGEETVGSF MLSALATGIC ASLCLHNGQS
KGINLNIRDM FLLTSLTWLI VSLFAAMPFT LYHGIGYTDA FFETMSGITT TGSTVLVGLD
TMDHSILIWR SLLQWLGGIG FIVMAVAILP FLNVGGMRLF RTESSDWSDK AVPRTQSMAK
HLFFIYILLT IICSVAYHLA GMTWFQAINH AMTTLSTGGY STSDSSMAAF SNSAHWVGVV
FMAAGGLPLL MFVQMIQQRD VKVWNDAQVK GFLFFLTFVS CSIGFWLWQT RDIALIDALR
LSSFNVVSVV TTTGYGLTDY GAWGAFANIA FLFLMFVGSC SGSTSGGIKI FRFQIAGAIM
REQLKQQCHP NGIFRERYNN RLITEDIVRS LITFVLLYMF VIVGLSVILV LTGLDPVTSF
TGAITAVSNV GPGLGPIIGP VGNFSTLPDL AKWALSLGML LGRLEILTVA VLFHPSFWKY
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