| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1984 |
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| Symbol | prc |
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| ID | 6483684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1939502 |
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| End bp | 1941550 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642737349 |
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| Product | carboxy-terminal protease |
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| Protein accession | YP_002041099 |
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| Protein GI | 194442997 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc)
[TIGR01222] septum site-determining protein MinC |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00711922 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.00523275 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACACTT TTTTTAGGCT TACCGCGTTA GCTGGCCTGC TTGCATTAGC AGGCCAGTCC
TTCGCCGTGG AAGATATTAC GCGTGCCGAT CAAATTCCCG TACTAAAGGA AGAGACGCAA
CATGCGACGG TGAGCGAGCG CGTAACGTCG CGTTTTACCC GCTCCCACTA TCGCCAGTTC
GATCTGGATG AGGCATTTTC GGCAAAGATC TTTGATCGCT ATCTGAATCT TCTCGACTAT
AGCCACAACG TTTTGTTGGC GAGCGATGTC GAGCAGTTTG CGAAAAAGAA AACCGTGTTG
GGCGATGAGC TGCGCACGGG TAAGCTGGAT GTTTTTTACG ATCTTTATAA CCTGGCGCAA
AAGCGCCGGT TTGAACGTTA CCAGTACGCG CTAAAAGTGC TGGAACGGCC AATGGATTTC
ACCGGAAACG ATACGTTTAA CCTGGACCGC AGTAAAGCGC CCTGGCCGAA AGATGAGGCT
GAGCTAAATG CGCTGTGGGA TGGTAAAGTG AAATTCGATG AGCTCAGTCT GAAACTCACC
GGCAAGAGCG ACAAAGAAAT TCGCGAAACG CTGACGCGTC GCTACAAATT CGCTATTCGT
CGCTTGGCGC AGACCAACAG TGAAGATGTG TTCTCGCTGG CGATGACCGC TTTTGCGCGT
GAAATCGACC CACATACGAA TTATCTTTCT CCCCGCAATA CCGAGCAGTT TAATACCGAA
ATGAGCCTGT CTCTGGAAGG TATCGGCGCG GTGCTGCAAA TGGATGACGA TTATACTGTC
ATTAACTCAT TGGTTGCCGG CGGCCCGGCA GCGAAGAGCA AGTCGATTAG CGTCGGCGAT
CGTATCGTCG GCGTAGGGCA GGCCGGAAAA CCGATGGTCG ACGTTATTGG CTGGCGTCTT
GACGATGTGG TGGCGCTGAT CAAAGGGCCG AAAGGCAGCA AGGTTCGACT GGAAATACTG
CCGGCTGGCA AAGGGACGAA AACGCGTATT ATCACGCTGA CGCGTGAACG GATTCGTCTT
GAAGATCGCG CGGTTAAAAT GTCGGTGAAA ACCGTCGGCA AGGAAAAAGT TGGTGTACTG
GATATTCCAG GCTTCTATGT TGGCTTGACC GATGATGTCA AAGTTCAGCT TCAGAAGCTG
GAAAAACAGA ACGTTAACAG CATCGTTATC GATCTGCGTT CAAACGGCGG TGGGGCGCTG
ACGGAAGCCG TTTCGCTTTC CGGTCTGTTT ATCCCTTCTG GTCCGATAGT TCAGGTGCGC
GACAATAACG GCAAAGTGCG TGAGGATAGC GACACCGACG GCGTGGTCTA CTACAAAGGC
CCGCTGGTGG TGCTGGTCGA TCGTTTCAGT GCCTCGGCAT CGGAAATCTT CGCTGCCGCG
ATGCAGGATT ATGGCCGCGC GCTGATTGTC GGTGAGCCGA CCTTCGGTAA AGGTACGGTA
CAGCAATATC GTTCGCTAAA CCGAATTTAC GATCAGATGC TTCGCCCGGA ATGGCCTGCG
CTGGGTTCGG TGCAGTACAC CATTCAGAAG TTTTACCGTG TCAACGGCGG TAGTACGCAG
CGTAAAGGGG TCACGCCGGA TATCATCATG CCGACTGGCA ATGAAGAGAC GGAAACCGGA
GAAAAATTTG AAGATAACGC CTTGCCGTGG GATAGCATTG ATGCGGCGAA ATACGTGAAA
TCGGACGATT TGGCCCCGTT TGGCCCGGAA TTATTGAAAG AACACAACGC GCGTATCGCC
AAAGATCCTG AGTTTCAGTA CATCATGAAG GATATTGCAC GTTTCAATGC CATGAAGGAT
AAGCGCAACA TCGTCTCTCT GAATTATGCG CAGCGTGAGA AAGAGAACAA TGAAGAAGAC
GCTCTGCGTC TGGCGCGTAT TAACGATCGG TTTAAACGTG AGGGTAAACC GTTGCTGAAG
AAACTGGACG ATCTGCCAAA GGATTACCAG GAGCCGGACC CGTACCTTGA TGAAACGGTG
AGGATTGCTC TGGACCTGGC GCATCTTGAA AAAGAAAAAC CAGCGGAGCA GGCGGCAGCC
AATAAGTAA
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| Protein sequence | MNTFFRLTAL AGLLALAGQS FAVEDITRAD QIPVLKEETQ HATVSERVTS RFTRSHYRQF
DLDEAFSAKI FDRYLNLLDY SHNVLLASDV EQFAKKKTVL GDELRTGKLD VFYDLYNLAQ
KRRFERYQYA LKVLERPMDF TGNDTFNLDR SKAPWPKDEA ELNALWDGKV KFDELSLKLT
GKSDKEIRET LTRRYKFAIR RLAQTNSEDV FSLAMTAFAR EIDPHTNYLS PRNTEQFNTE
MSLSLEGIGA VLQMDDDYTV INSLVAGGPA AKSKSISVGD RIVGVGQAGK PMVDVIGWRL
DDVVALIKGP KGSKVRLEIL PAGKGTKTRI ITLTRERIRL EDRAVKMSVK TVGKEKVGVL
DIPGFYVGLT DDVKVQLQKL EKQNVNSIVI DLRSNGGGAL TEAVSLSGLF IPSGPIVQVR
DNNGKVREDS DTDGVVYYKG PLVVLVDRFS ASASEIFAAA MQDYGRALIV GEPTFGKGTV
QQYRSLNRIY DQMLRPEWPA LGSVQYTIQK FYRVNGGSTQ RKGVTPDIIM PTGNEETETG
EKFEDNALPW DSIDAAKYVK SDDLAPFGPE LLKEHNARIA KDPEFQYIMK DIARFNAMKD
KRNIVSLNYA QREKENNEED ALRLARINDR FKREGKPLLK KLDDLPKDYQ EPDPYLDETV
RIALDLAHLE KEKPAEQAAA NK
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