Gene SNSL254_A1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1100 
Symbol 
ID6482406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1108609 
End bp1109151 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content52% 
IMG OID642736503 
Producthypothetical protein 
Protein accessionYP_002040262 
Protein GI194443529 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000278688 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.979785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTA AACCTGACGA TAACTGGCGC TGGTATTATG ATGAAGAGCA CGATCGTATG 
ATGCTCGATC TCGCCAATGG TATGCTTTTT CGCTCGCGCT TCTCTCGTAA AATGCTTACG 
CCGGACGCGT TTTGCCCGAC CGGTTTTTGT GTGGATGACG CTGCGCTCTA TTTTTCCTTT 
GAAGAAAAAT GCCGGAATTT CGAATTAACC AAAGAGCAAC GCGCGGAGCT GGTGTTGAAT 
GCGCTGGTGG CGATTCGCTA TCTCAAACCG CAGATGCCAA AAAGCTGGCA TTTTGTGGCG 
CATGGCGAAA TGTGGACCCC AGGAACGGGC GATGCCGCAA GCGTCTGGTT AAGCGATACG 
GCGGAACAGG TTAATTTGCT GGTCGTTGAG CCGGGAGAAA ATGCCGCGTT GTGTCTGCTG 
GCCCAGCCGG GCGTGGTGAT AGCAGGCCGA ACCATGCAGC TTGGCGATGC GATTAAAATT 
ATGAACGACA GGCTGAAACC GCAGGTTCAC TGTCACAGTT TCAGCCTTGA ACAAGCGGTT 
TAA
 
Protein sequence
MRIKPDDNWR WYYDEEHDRM MLDLANGMLF RSRFSRKMLT PDAFCPTGFC VDDAALYFSF 
EEKCRNFELT KEQRAELVLN ALVAIRYLKP QMPKSWHFVA HGEMWTPGTG DAASVWLSDT 
AEQVNLLVVE PGENAALCLL AQPGVVIAGR TMQLGDAIKI MNDRLKPQVH CHSFSLEQAV