Gene SAG0075 details

Gene Information

• Locus tag: SAG0075
• Symbol: rpsE
• ID: 1012825
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 84665
• End bp: 85159
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637315230
• Product: 30S ribosomal protein S5
• Protein accession: NP_687111
• Protein GI: 22536260
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.774512
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTTA AAGATAATGC AGTAGAACTT GAAGAGCGCG TTGTTGCGAT TAACCGCGTT 
ACAAAAGTTG TTAAAGGTGG ACGTCGTCTA CGTTTTGCAG CTCTTGTAGT TGTTGGTGAC 
CGTAATGGTC GTGTTGGTTT TGGTACAGGT AAAGCTCAAG AAGTACCAGA AGCTATTCGC 
AAAGCTGTTG AAGCTGCTAA GAAAAACATG GTTGAAGTTC CTATGGTCGG TACAACAATT 
CCTCACGAAG TTCGTTCAGA ATTTGGTGGA GCGAAAGTAT TGTTGAAACC AGCTGTTGAG 
GGTGCTGGGG TTGCCGCTGG GGGTGCTGTT CGTGCCGTCA TCGAATTAGC AGGTGTTGCA 
GATATTACAT CTAAATCACT TGGTTCAAAC ACTCCAATCA ACATTGTTCG CGCAACTGTT 
GAGGGCTTGA AACAATTAAA ACGTGCAGAA GAAGTTGCTG CTTTACGTGG CATTTCTGTT 
TCTGACTTAG CATAA 

 

Protein sequence

MAFKDNAVEL EERVVAINRV TKVVKGGRRL RFAALVVVGD RNGRVGFGTG KAQEVPEAIR 
KAVEAAKKNM VEVPMVGTTI PHEVRSEFGG AKVLLKPAVE GAGVAAGGAV RAVIELAGVA 
DITSKSLGSN TPINIVRATV EGLKQLKRAE EVAALRGISV SDLA