Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG0064 |
Symbol | rpsC |
ID | 1012814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | + |
Start bp | 79871 |
End bp | 80524 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637315219 |
Product | 30S ribosomal protein S3 |
Protein accession | NP_687100 |
Protein GI | 22536249 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00697995 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTCAAA AAGTACATCC AATTGGTATG CGTGTCGGAA TCATCCGTGA CTGGGATGCG AAATGGTATG CTGAAAAAGA ATACGCGGAT TACCTTCATG AAGATCTTGC AATCCGTAAA TTCATTAATA AAGAATTAGC TGACGCATCA GTTTCAACTA TTGAAATTGA ACGTGCAGTA AACAAAGTTA TTGTTTCACT TCACACTGCT AAACCAGGTA TGGTTATCGG TAAAGGTGGA GCAAACGTTG ACGCTCTTCG TGGTCAACTT AACAAATTAA CTGGAAAACA AGTACACATC AACATCATTG AAATCAAACA ACCTGATTTA GATGCTCACC TTGTTGGTGA AAATATTGCT CGTCAATTAG AGCAACGTGT TGCTTTCCGT CGTGCTCAAA AACAAGCAAT CCAACGTACA ATGCGTGCAG GAGCTAAAGG TATTAAAACT CAAGTTTCTG GTCGTTTGAA CGGTGCTGAT ATCGCTCGTG CTGAAGGTTA TTCAGAAGGA ACTGTTCCGC TTCACACGCT TCGTGCTGAT ATCGACTATG CTTGGGAAGA AGCTGACACA ACTTATGGTA AACTTGGCGT TAAAGTTTGG ATTTACCGTG GAGAAGTTCT TCCAGCTCGT AAAAACACTA AAGGAGGCAA ATAA
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Protein sequence | MGQKVHPIGM RVGIIRDWDA KWYAEKEYAD YLHEDLAIRK FINKELADAS VSTIEIERAV NKVIVSLHTA KPGMVIGKGG ANVDALRGQL NKLTGKQVHI NIIEIKQPDL DAHLVGENIA RQLEQRVAFR RAQKQAIQRT MRAGAKGIKT QVSGRLNGAD IARAEGYSEG TVPLHTLRAD IDYAWEEADT TYGKLGVKVW IYRGEVLPAR KNTKGGK
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