Gene Rxyl_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0823 
Symbol 
ID4117075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp858184 
End bp858636 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content72% 
IMG OID638035607 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_643603 
Protein GI108803666 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGCTTA CAAAGAAGAG CAAGTACGCT GTGCGGGCGC TGGTGGAGGT CGTGCTCCGC 
GGCTCCGGCG GTCCGGTCGG GGTCTCGGAG ATCGCGCGGC GCCAGCGCAT ACCCGAGCGT 
TTTCTGGAGC AGATCTTCGG CGAGCTCCGG CGGGCGGGGA TACTGGAGAG CCACCGCGGG 
GCGCACGGCG GCTACAGCTT CTCCATGCCG CCCGAGGAGG TCACGGTGCT GGACATCGTG 
GAGGTGCTGG ACGGCGAGAT CCGGCCCGCC CGGTGCAGCG CGGGCGGGGT CTGCTACATC 
GACGACGCGC CGCTGTGCTC CACGAGCCGT GTCTGGGACG AGGCGCGGGT GGCCCTCGAG 
GGGGTCTTCG GGCGCTACAG CATCGCCCAG CTCGCCGCGG CCGAGCGCGA GATCCGCGCC 
GGGCAGGAGG AGAGAGCCCC CGTGGGCAAG TAG
 
Protein sequence
MRLTKKSKYA VRALVEVVLR GSGGPVGVSE IARRQRIPER FLEQIFGELR RAGILESHRG 
AHGGYSFSMP PEEVTVLDIV EVLDGEIRPA RCSAGGVCYI DDAPLCSTSR VWDEARVALE 
GVFGRYSIAQ LAAAEREIRA GQEERAPVGK