| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0105 |
|---|
| Symbol | |
|---|
| ID | 4117772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 110258 |
|---|
| End bp | 111226 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638034897 |
|---|
| Product | quinolinate synthetase |
|---|
| Protein accession | YP_642896 |
|---|
| Protein GI | 108802959 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0379] Quinolinate synthase |
|---|
| TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGGCGG CAGGCGCGGT GGTTTCCGCT GTTGAGGGGC TGGACCTCTT CGAGGAGATA
GACCGGCTGC GGGAGGAGCT CGGGGCGGTG ATCCTGGCCC ACTACTACCA GGAGCCCGAG
ATACAGGACA TCGCGGACTT CATCGGGGAT TCGTTGCAGC TGGCGCGTCA GGCCCAGCGG
ACCGACGCGC GGGTCATCGT CTTCTGCGGG GTACACTTCA TGGCCGAGAC GGCCAAGATC
CTCAACCCGG AGAAGACCGT GGTGCTGCCG GATCTGGAGG CGGGGTGTTC GCTCGCCGAC
AGCTGTCCGC CGGAGCGGTT CGCCGCGTTC CTCGAGGAGC ATCCCGGGCA CGCGGTCGTC
TCCTACGTCA ACACCTCGGC GGCGGTCAAG GCCCTCTCCG ACGTCATCTG CACCTCCTCC
AACGCCGAGA AGGTCATAGC CACGATCCCG GAGGGGACCC CGATAGTCTT CGCCCCCGAC
CGGCACCTCG GCCGCTATCT CATGGAGCGG ACCGGGCGCA AGATGGTGCT GTGGCCGGGG
ACGTGCATGG TGCACGTGCG GTTCTCGGAG AAGAAGATCC GGCAGCTCAA GGTGCGCCAC
CCCGACGCCG AGGTGCTCGC GCACCCCGAG TGCGAGGAGG CGGTCCTGCG GCTCGCGGAC
CACGTGGGGA GCACCTCCTC GCTGCTCCGG CGGGCCGTAG AGAGCCCCGC GCGGCGCTTC
ATCGTGGCCA CCGAGCCCGG CATCATCCAC CAGATGAAGA AGGCCGCCCC CGGCAAGGAG
TTTGTCCGGG CGCCGGGGCG GGGCCCTGAG GGTTCCTGCG AGGCGTGCGG CGAGTGCCCC
CACATGCGCC GCAACACCCT CGAGAAGCTC TACCGGTGCA TGCGGGACCT CCGACCCGAG
ATAACCCTCG ACGAGGAGCT CAGGCTGCGA GCCCTCAGGC CCATCGAGCG CATGCTGGAG
ATCGGGTGA
|
|---|
| Protein sequence | MRAAGAVVSA VEGLDLFEEI DRLREELGAV ILAHYYQEPE IQDIADFIGD SLQLARQAQR
TDARVIVFCG VHFMAETAKI LNPEKTVVLP DLEAGCSLAD SCPPERFAAF LEEHPGHAVV
SYVNTSAAVK ALSDVICTSS NAEKVIATIP EGTPIVFAPD RHLGRYLMER TGRKMVLWPG
TCMVHVRFSE KKIRQLKVRH PDAEVLAHPE CEEAVLRLAD HVGSTSSLLR RAVESPARRF
IVATEPGIIH QMKKAAPGKE FVRAPGRGPE GSCEACGECP HMRRNTLEKL YRCMRDLRPE
ITLDEELRLR ALRPIERMLE IG
|
|---|
| |