Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1027 |
Symbol | |
ID | 4895558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 1059716 |
End bp | 1061224 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640111614 |
Product | ABC transporter related |
Protein accession | YP_001042910 |
Protein GI | 126461796 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.8293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGGTC TCGCCATCGA CATGACCGGC ATCTCCAAGG CCTTCGGGCC GGTGAAGGCG CTGGTCGACG CCGACCTCCG CGTGGCGCGC GGCACGATCC ACGGGCTCGT GGGCCAGAAC GGCGCCGGCA AATCGACGAT CATCAAGGTG CTGGCCGGGA TCCTGAAACC CGACAGCGGC CGTATCACCA TCAACGGCAC CCAGGTGGAG AGCCTGACGC CCGCCTCCGT CGAGCGGCTG GGCGTCCATT TCATCCATCA GGAGCGGCTT CTGGTGCCGA CGGCCACCGT GGCCGAGGCG GTGTTCCTGA ACTACGAGCT GCGCTTCGGC CCCTTCCTGC GCCCCGGCGC GATGAAGCGG CGCGCTGAAG AGCTGATCCG CACCCATTTC GGCCTCGAGC TGCCGGGCGA CACGCTGGTG CGCGACCTGA CGACCGCACA GCAGAAGATC GTGCAGATCA CCCGGGCGCT GGCGCAGGAG GCGCAGGTGC TCGTGCTGGA CGAGCCGACC GCGGCGCTGG TCAAACGCGA GGTGGACAGC CTCTTTGCGG TGCTGCGCAA CCTGCGGGCG CAGGGCATCG CCGTGATCTT CATCTCGCAC TACATGCAGG AGATCGAGGA TCTCTGCGAC GAGGTGACCG TGATGCGCAA CGGCACCGAT GTGGGCGTCG TCCGCCCCGG CGAGACCTCG ATCGACGAGA TCGTCTCGAT GATGATCGCC CGCGACGTGG GCGAGATGTT CCCCCGCCGC AGCCACGCGC TCGGCGCGCC GGTGCTGCGG GTCGAGGGCC TGTCGCAGGC GGGCCATTTC CGCAACGTGA GCTTCGAGGT CCGCGCGGGC GAGGTGCTGG GCATCACGGG CCTGCTCGGC TCGGGCGTGA AGGAGCTGGT CGAGTGCCTC TTCGGGCTCG AACAGCCCGA CGCGGGCAGC GTCACCATCG ACGGCGAGGT GCGCCGCTTC GCCAATCCGG GCCGGGCGGT GCAGGGCCGG GTGGCCCTCG TCCCCGAGGA CCGGCGGGCG CATGGCGTGG CCACCGACAT GTCGGTGCGC GACAACATCA CCATCGCGAG CCTCGAGCGT TACATGACCC GCGGCTTCGT CTCCCGCGCG CGGGAGAACG AGGCAGTGGA CGGCTTCATC CGCGAGCTCT CGATCAAGAC GCCGCATCGC GACCAGCTGG TGCGCAACCT CTCGGGCGGC AACCAGCAGA AGGTGGCTCT CGCCAAATGG CTCTCGTGCC AGAGCCGGGT CTATGTGCTC GACGAGCCGA CCGTCGCGGT CGATGTGGGC GCCAAGGTCG AGATCTACAC GCTGCTCAAC CGGCTGGCGG CGGAAGGGGC GGCGATCCTC TTCCTCTCCT CCGATCTGCT CGAGATCGCG GGCTTCTGCG ACCGCGCCCT CGTCGTCTAC CGCGGCACGC TGAACGGAGA GTTCGCGGGC GAGACGCTCG ACAGCGACCT GCTCCTGGCC GCCGCCTCGG GCGCGCGGGC CCAACGAAAG GAGGCCTGA
|
Protein sequence | MSGLAIDMTG ISKAFGPVKA LVDADLRVAR GTIHGLVGQN GAGKSTIIKV LAGILKPDSG RITINGTQVE SLTPASVERL GVHFIHQERL LVPTATVAEA VFLNYELRFG PFLRPGAMKR RAEELIRTHF GLELPGDTLV RDLTTAQQKI VQITRALAQE AQVLVLDEPT AALVKREVDS LFAVLRNLRA QGIAVIFISH YMQEIEDLCD EVTVMRNGTD VGVVRPGETS IDEIVSMMIA RDVGEMFPRR SHALGAPVLR VEGLSQAGHF RNVSFEVRAG EVLGITGLLG SGVKELVECL FGLEQPDAGS VTIDGEVRRF ANPGRAVQGR VALVPEDRRA HGVATDMSVR DNITIASLER YMTRGFVSRA RENEAVDGFI RELSIKTPHR DQLVRNLSGG NQQKVALAKW LSCQSRVYVL DEPTVAVDVG AKVEIYTLLN RLAAEGAAIL FLSSDLLEIA GFCDRALVVY RGTLNGEFAG ETLDSDLLLA AASGARAQRK EA
|
| |