| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3866 |
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| Symbol | |
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| ID | 5085414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | + |
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| Start bp | 764462 |
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| End bp | 765667 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640485425 |
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| Product | TRAP-type C4-dicarboxylate transport system periplasmic component-like protein |
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| Protein accession | YP_001170026 |
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| Protein GI | 146279868 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0415964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTGGG AGACGATCCG CCTCGCCTTC ATCGCCATCG TCAGGAACAA GCTGCGGTCG
TTCCTGACGG TCCTCGGGGT CGTGATCGGG GTCGCCGCGG TCATCGCCAT GGTGACGGTG
GGGCAGGGCT CGTCGGCGCA GGTCTCGGCC AATGTGGCAA GCCTCGGGAC CAACGTGTTG
ATCGTGCGGC CGGGCAAGCG GATGATGGGG CCGGGGACGC GGGACACCTC GCCCGCCTTC
ACGCTGCGCG ATGTCGAGGC CCTGCAGGAG CTGCCCGTGA TCCGCTCGGT CGCGCCCAAC
ACCTCTTCGG GCCAGACCGT GATCTATGGC AATGCCAACG CCACCACCTC CATCACCGGC
ACCACGAGCG ACTATCTGAC CGTGGCGAAC TGGGTGCTCG ACAGCGGGCG GGCCTTCACG
ATGGCCGAAG AACGGCAGGG CGCCGCCGTC TGCGTTCTGG GCGACACGGT GCGCCAGAAG
CTCTTCGGGG CGGCCGATCC GCTTGGCCGG ACGGTGCGGA TCCGGTCGAT CTCGTGCGAG
GTGGTGGGCC TTCTGCAGGC GAAGGGCGCG GGCTCGTTCG GGCAGGATCA GGACGATCTC
GTGCTGATGC CGATCCGCAC CGTGCAGCGG CGGCTCGCGG GCGATCAGGA TGTCTCGGGC
ATGTCGATCG CGTTGCAGGA GGGCGTCTCG GCCACCCGCG GCATCCGCGA GATCAGCGCT
CTCCTGCGCG AGAGGCGCCG TATCGGCCCG GGCGACGAGG AGAATTTCTC GGTCACCGAC
ATGAAGGAGA TCGCCTCCAT GCTGACCTCC ATCAACACGG TGCTTGCGGG GCTGCTGTCG
TCGGTGGCGG CCGTGAGCCT GCTGGTGGGC GGCATCGGCA TCATGAACAT CATGCTCGTG
TCGGTGACCG AACGCACGCG CGAGATCGGC ATCCGCCTTG CGGTGGGGGC CACGGCGGGA
CAGGTGCTGA CACAGTTCCT TGTCGAGGCG GTCGTGCTGT CGGTGCTGGG GGGCATGATC
GGAATCGCGG CGGGCCTCGG TCTCGCCTTC GCGGCCTCGC GCTACATGCT GATCCCCTTC
ACGCCGGACC CGCTGGTCGT GCTGCTGGCC TTCGGCTTCT CGGCGCTGGT GGGGGTGATC
TTCGGCTATT TCCCCGCACG CCGTGCCGCC CGCCTCGACC CGATCGAGGC CCTTCGCCAT
CAGTGA
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| Protein sequence | MLWETIRLAF IAIVRNKLRS FLTVLGVVIG VAAVIAMVTV GQGSSAQVSA NVASLGTNVL
IVRPGKRMMG PGTRDTSPAF TLRDVEALQE LPVIRSVAPN TSSGQTVIYG NANATTSITG
TTSDYLTVAN WVLDSGRAFT MAEERQGAAV CVLGDTVRQK LFGAADPLGR TVRIRSISCE
VVGLLQAKGA GSFGQDQDDL VLMPIRTVQR RLAGDQDVSG MSIALQEGVS ATRGIREISA
LLRERRRIGP GDEENFSVTD MKEIASMLTS INTVLAGLLS SVAAVSLLVG GIGIMNIMLV
SVTERTREIG IRLAVGATAG QVLTQFLVEA VVLSVLGGMI GIAAGLGLAF AASRYMLIPF
TPDPLVVLLA FGFSALVGVI FGYFPARRAA RLDPIEALRH Q
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