Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3068 |
Symbol | |
ID | 5083155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 3139210 |
End bp | 3140367 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640484640 |
Product | ribonuclease D |
Protein accession | YP_001169257 |
Protein GI | 146279098 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.439907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.252562 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACGA TCACCACCAC CGAGGCGCTG GCCGCCTTCT GCGAGGCCGC CAAGGCCGCC CCCTATGTCA CGATCGACAC GGAGTTCCTG CGCGAACGCA CCTACTGGTC CAAGCTCTGC CTGATCCAGA TGGCGCTTCC CGGCAAGACT GGCGAGGCGG TTCTCGTCGA TCCGGTCGAG GCGCCCGACA TGTCGCTCGA ACCGCTCTAC GACCTGTTCC GGCACGAGCC GACGGTCAAG GTGTTCCACG CCGCCCGGCA GGATCTCGAG ATCTTCTTCG TCGAAGGCAG GGTTTTCCCC ACGCCGCTGT TCGATACGCA GGTGGCCGCG ATGGTCTGCG GCTTTGGCGA GCAGGTGGGC TACGAGACGC TGGTCAAGAA GATCGCGCGC GAGCAGCTGG ACAAGACTTC GCGCTTCACC GACTGGTCGC GCCGGCCGCT GAGCGACGCG CAGAAGACCT ATGCCATTGC CGACGTGACG CATCTGCGGG TGATCTACGA GTGGCTCTCG GCCCAGATCG AGAAGAACGG CCGGCAGCGG TGGGTCGAGG AAGAGCTGGC GATCCTCACC GACCCCGAGA CCTACACCGT CCGCCCCGAG GAAGCCTGGC TGCGGATCAA GACCCGCACC ACCTCGGGCC GCTTCCTTGC GGTGGTCAAG GAGCTTGCGC GCTTCCGCGA GGAATATGCG CAGAAGAACA ACGTTCCGCG CTCGCGGGTG CTCAAGGACG ATGCCCTTCT CGAGATCGCC TCGACGCGGC CGACGAATGT CGAGGAACTG GGTCGCTCGC GGCTCTTGCT GCGCGAGGGC CGGCGGGGGG ATATCGCGGA CGGGATCCTC GCTGCGGTCA AGGCGGGGAT GGAGGTGAAG GCCGAGGATC TTCCCAAGCC CGACCTGTCC CGCGAGCAGC TTCAGGTGAA CCCGGCCTTG GCCGATCTGC TGCGGGTGCT GCTGAAGGCC AAGTCGGAGA GCCTTGGTGT GGCGGCCCGG CTGATTGCCT CGGCCTCGGA TCTCGACGCC ATCGCGGCGG GCGAGCGCGA CCTGCCGACG CTCAAGGGTT GGCGGCTGGA AGCCTTCGGC GCCGATGCGC TGCGGCTCTG CCGGGGTGAG ATCGCGCTTT CGGCCAAGGG CAACGATGTG CGGGTGGTCA AGCTCTGA
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Protein sequence | MKTITTTEAL AAFCEAAKAA PYVTIDTEFL RERTYWSKLC LIQMALPGKT GEAVLVDPVE APDMSLEPLY DLFRHEPTVK VFHAARQDLE IFFVEGRVFP TPLFDTQVAA MVCGFGEQVG YETLVKKIAR EQLDKTSRFT DWSRRPLSDA QKTYAIADVT HLRVIYEWLS AQIEKNGRQR WVEEELAILT DPETYTVRPE EAWLRIKTRT TSGRFLAVVK ELARFREEYA QKNNVPRSRV LKDDALLEIA STRPTNVEEL GRSRLLLREG RRGDIADGIL AAVKAGMEVK AEDLPKPDLS REQLQVNPAL ADLLRVLLKA KSESLGVAAR LIASASDLDA IAAGERDLPT LKGWRLEAFG ADALRLCRGE IALSAKGNDV RVVKL
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