Gene Rru_A2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2129 
SymbolfumC 
ID3835556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2471638 
End bp2473101 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content67% 
IMG OID637826231 
Productfumarate hydratase 
Protein accessionYP_427216 
Protein GI83593464 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000218779 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCGT CGCCTCCCCC GCCCGCCCCC GCCACCCGCC GCGAAACCGA CAGCATGGGC 
GCCATCGACG TCCCGGCCGA TCGCTATTGG GGGGCGCAGA CCCAGCGCTC GCTTGAGCAT
TTCTCGATCG GCATCGAGCG CATGCCCGAA GCCCTGATCC GCTCCTTCGG CACCTTGAAA
GAGGCGGCCG CCTTCGCCAA CCGCTCGCTT GGCCAGCTTG ACGAGACGCG CGCCGATTTG
ATCGTGACCG CCGCCCGCGA GGTCGCCGAG GGACGGCTGT CGGAGCATTT CCCCCTGCGG
GTCTGGCAGA CCGGCAGCGG CACCCAGACC AACATGAACG TCAACGAGGT GATCGCCAAT
CGGGCGATTG AACTAAGCGG CGGCGTGCTG GGCTCGAAAA CGCCGATCCA CCCCAATGAT
CACGTCAATA TGGCGCAATC GTCCAATGAC ACCTTCCCCA CCGCCATGCA TATGGCGGCG
GTCACGGCGC TGTCGTGCAC GCTGCTGCCG CAGGTGCGCG GCCTGCGCGC CAGCCTTGCG
CAAAAGGCGA AGCTTTTCGC GCCCATCGTC AAGATCGGCC GCACCCACCT GCAAGACGCC
GTGCCTTTAA CCCTGGGGCA GGAGTTTTCG GGCTATGTCG CCCAGCTCGA TCAGGCGATC
GACCGCCTGG AAGCCACCCT GCCCGGCTTG CGCGAACTGG CCTTGGGCGG CACGGCGGTG
GGCACCGGTC TCAACACCCA TCCGGCCTTC GCCGTCCGCG CCATCGCCCG CATCAGCGAA
ATCACCGGCC ATCCCTTCCG TCAGGCCGAT AATCTGTTCG CCGCCCTGGC CGCCCATGAT
GCCATGGTCG CCGCCAGCGC CGGTCTGCGC GGTCTGGCCG TGGCCTTGAC CAAGATCGCC
AATGATATCC GCTGGCTGGG CAGCGGTCCG CGCTGCGGGC TGGGCGAATT GATCCTGCCC
GAGAATGAGC CGGGGTCGTC GATCATGCCG GGCAAGGTCA ATCCCACCCA ATGTGAAAGC
CTGCTGATGA TCTGCCTTCA GGTGATGGCC GCCGATGGCG CCGTGGCCAT GGCCGGGTCC
CAGGGCAATT TCGAACTCAA TGTCCACAAG CCGCTGATCG CCTATAACGT CTTGCAGGCG
ATCACCCTGC TCGCCGATGG CTGCAAGGCT TTCACCCACT TCCTGGTCGA GGGCCTGAGC
GCCGACGAGA CGCGGATCGC CGAAATGGTC GATCGTTCGC TGATGCTGGT GACGGCGCTT
ACCCCGTCGA TCGGCTATGA CCGCGCCGCC GCCATCGCCA AGGCCGCCCA TGCCAACGGC
ACCACCCTGC GCGAGGAAAC CCTGGCCAGC GGCCTGATGG ACGACGCGGC CTTCACCGCC
GCCGTTCAGC CCGCCCGCAT GGCCCATCCC CATGGGACAG CCGACGACAT CGACAAGGAC
GGCGGAGGGC CGCGCCAAGG CTAG
 
Protein sequence
MPASPPPPAP ATRRETDSMG AIDVPADRYW GAQTQRSLEH FSIGIERMPE ALIRSFGTLK 
EAAAFANRSL GQLDETRADL IVTAAREVAE GRLSEHFPLR VWQTGSGTQT NMNVNEVIAN
RAIELSGGVL GSKTPIHPND HVNMAQSSND TFPTAMHMAA VTALSCTLLP QVRGLRASLA
QKAKLFAPIV KIGRTHLQDA VPLTLGQEFS GYVAQLDQAI DRLEATLPGL RELALGGTAV
GTGLNTHPAF AVRAIARISE ITGHPFRQAD NLFAALAAHD AMVAASAGLR GLAVALTKIA
NDIRWLGSGP RCGLGELILP ENEPGSSIMP GKVNPTQCES LLMICLQVMA ADGAVAMAGS
QGNFELNVHK PLIAYNVLQA ITLLADGCKA FTHFLVEGLS ADETRIAEMV DRSLMLVTAL
TPSIGYDRAA AIAKAAHANG TTLREETLAS GLMDDAAFTA AVQPARMAHP HGTADDIDKD
GGGPRQG