| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3807 |
|---|
| Symbol | |
|---|
| ID | 6284898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 53925 |
|---|
| End bp | 54878 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642618308 |
|---|
| Product | proline iminopeptidase |
|---|
| Protein accession | YP_001892350 |
|---|
| Protein GI | 187926005 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.180049 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAT TGCGCACGCT GTATCCGCCC ATCGAGCCGT ACGAAACCGG CATGCTCGAC
GTTGGCGATG GCCACACGAT TTATTACGAG CGCGTCGGCA CACCCGGTGC CAAGCCCGCA
GTGTTCCTGC ACGGTGGGCC GGGTGGCGGC ATCTCGCCCG ACCATCGCCG TGTGTTTGAC
CCCGCGCGCT ACGACGTGAT GCTGTTCGAC CAGCGCGGCT GTGGTCGGTC CACGCCGTAC
GCGGGGCTCG AAGCCAACAC CACGTGGCAC CTCGTGGCCG ACATCGAACG CCTGCGGGCG
ATGGTGGGTG CCGAGCGGTG GCTCGTATTC GGCGGTTCAT GGGGTTCGAC GCTGGCGCTC
GCTTACGCAC AAAAGTCTCC CGAGCGTGTG AGCGAACTGG TGCTGCGCGG TGTCTACACC
GTGACGCAGG CCGAACTGCG GTGGTACTAC CAATACGGCG TGTCGGAGAT GTTCCCCGAG
AAATGGGCAC GCTTTCAGGC GCCCATTCCC GAGGCCGAAC GTGGCGACAT GATCGCAGCC
TATCGCAAGG TCCTCACGGG CGAGGACCGC GCCAGGCAGA TCGAAGCGGC ACGCGCCTGG
AGCGTATGGG AGGGCGAGAC CATCACCCTG TTGCCCGATC CCGGCAACAG CGCCAAGCAC
GCCGACGACC ATTTCGCCTT GGCCTTTGCG CGGCTGGAGA ACCACTACTT CACCCACCAA
TGCTGGCTGG AAGAAGGCCA ACTGCTGCGC GAGGCGCAGC GGCTGGCGGG CATCCCGGGC
GTGATCGTGC ACGGCCGCTA CGACATGCCG TGCCCTGTGC GCTATGCCTA TGCGCTGCAC
CAGGCGTGGC CGGACGCCGA CTTTTACCTG ATCGAAGGCG CCGGCCATGC GTGGACGGAG
CCCGGCATCC TCGATCAGCT TGTTGCCGCA ACCGACCGTT TTGCGGACAG GTAG
|
|---|
| Protein sequence | MSELRTLYPP IEPYETGMLD VGDGHTIYYE RVGTPGAKPA VFLHGGPGGG ISPDHRRVFD
PARYDVMLFD QRGCGRSTPY AGLEANTTWH LVADIERLRA MVGAERWLVF GGSWGSTLAL
AYAQKSPERV SELVLRGVYT VTQAELRWYY QYGVSEMFPE KWARFQAPIP EAERGDMIAA
YRKVLTGEDR ARQIEAARAW SVWEGETITL LPDPGNSAKH ADDHFALAFA RLENHYFTHQ
CWLEEGQLLR EAQRLAGIPG VIVHGRYDMP CPVRYAYALH QAWPDADFYL IEGAGHAWTE
PGILDQLVAA TDRFADR
|
|---|
| |