Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3697 |
Symbol | xerC |
ID | 6287354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3876531 |
End bp | 3877517 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642627281 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_001901247 |
Protein GI | 187930760 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAAT CCGCATCCGT CGATGACCAT GGCGCCCAAG CGCCGCATCC GCAGATTGCG GCGTACCTGG ATGCGCTGAA GTTCGAGCGG CAGCTCTCGC CGCATACGCT GCAGAGCTAC ACCCGCGAGC TGGCCGTGTT GCAGCGCCTG GGTGCGCAGC ACGCCGCCAA TATCGACCTG ACGCAACTGC AGTCGCACCA CATTCGCCGC ATGATGGCGC AACTGCATGG CGACGGTTTG TCCGGTCGCA GCATTGCGCG GGCGCTGTCG GCGTGGCGCG GCTGGTTCAA ATGGATGGCG CTGCGCGATG CCGCTGTCAC CGCCAATCCC GTCGATGGCG TACGCGCCCC GAAGAGCCCG AAGCGGCTGC CGAAAGCGTT GTCCGTCGAG CAAGCCGTCG CGCTGATGGA GCAATTGCCC GGCGACGACG CCGAGACGAT TCGCGACCGC GCCGTCAACG AGCTGTTCTA TTCGTGCGGG TTGCGGCTCT CCGAGCTCGT CAGCCTCGAC ATGCGCCACG TGAAGGCCGG CGCGTATGAA TCGGCGAGTT GGCTCGATCT GGAGGCGCGC GAGGTGCAGG TGCTCGGCAA GGGCAGCAAG CGGCGCACCG TGCCGGTGGG CACCAAGGCG ACGGAAGCGC TGGCTGCGTG GCTGGCGGTG CGCGCGCAGC TTGCCAAGTC GGACGCCGCA CCTGAAGACG CGCACGCGCT GTTTCTCTCG CCGCGGGGCA AGCGGCTGGC GCAGCGGCAG ATTCAATTGC GCATGAAGCG CAACGCCATC GCGGCGGGTG TGCCGGCGGA TGTGCACCCG CACGTGCTGC GGCATTCGTT TGCCACGCAC ATGCTGCAGT CGTCCGGCGA CCTGCGCGCG GTGCAGGAAC TGCTCGGGCA CGCCAGCATT GCCAGCACGC AGGTTTATAC TTCGCTCGAT TTTCAGCACC TGGCCAAGAT CTACGATCAG GCGCATCCCC GCGCGAAGAA GAAGTAG
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Protein sequence | MPQSASVDDH GAQAPHPQIA AYLDALKFER QLSPHTLQSY TRELAVLQRL GAQHAANIDL TQLQSHHIRR MMAQLHGDGL SGRSIARALS AWRGWFKWMA LRDAAVTANP VDGVRAPKSP KRLPKALSVE QAVALMEQLP GDDAETIRDR AVNELFYSCG LRLSELVSLD MRHVKAGAYE SASWLDLEAR EVQVLGKGSK RRTVPVGTKA TEALAAWLAV RAQLAKSDAA PEDAHALFLS PRGKRLAQRQ IQLRMKRNAI AAGVPADVHP HVLRHSFATH MLQSSGDLRA VQELLGHASI ASTQVYTSLD FQHLAKIYDQ AHPRAKKK
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