Gene Rpic_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2421 
SymboldnaG 
ID6286190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2525142 
End bp2526953 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content66% 
IMG OID642625999 
ProductDNA primase 
Protein accessionYP_001899987 
Protein GI187929500 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCCGC AGCCGTTCAT TGACGATCTG CTCAACCGCG TCGATATCGT CGACGTGGTG 
GGCCGTTACG TGCAGTTGAA GAAGGGCGGC GCCAATTTCA TGGGGCTGTG CCCCTTCCAT
AACGAGAAGT CGCCGTCGTT CTCGGTGTCG CCCACCAAGC AGTTCTATCA CTGCTTCGGC
TGCGGCGCGC ATGGGTCGGC CATCGGCTTC CTGATGGAGT TTTCCGGGCA ATCGTACGTC
GAGGCCATCA AGGATCTTGC GCAGTCCGTG GGCATGGTGG TGCCCGAAGA GCGCGGTGGC
CTGCCGCCCG CCGCGCGTGC GGAGCAGCAA GCCAAGACCG TCGCACTCGG CGACGTCATG
GCCCGTGCCT GCGACCACTA CCGCAAGCAA TTGCGCAGCG CCCCCAATGC CATCCAATAC
CTCAAAGGCC GCGGCCTGAC GGGCGAGATC GCCGCACACT TCGGCCTCGG CTATGCGCCG
GACGATTGGC AATCGCTCGA AGCCGTGTTC GGCCCATACC GCGAAGACGC CACTGCCGCA
CCGCTCATCG AAGCCGGCCT CGTCATTGAA AGCGAGAAGA CCGGCGCCGA TGGCTCGCAC
CGCCGCTACG ACCGCTTCCG CGATCGCATC ATGTTCCCCA TCCGCAATAC CAAAGGCGTG
GTGATCGGCT TTGGCGGCCG GGTGCTGGGG CAAGGCGAGC CGAAATATCT CAACTCCCCC
GAAACGCCGC TGTTCAGCAA GGGCACCGAG CTGTACGGGC TGTTCGAGGC ACGCAACGCC
ATCCGCGAGT TCGACTATGT GCTGGTCGTG GAAGGCTATA TGGACGTCGT CGCGCTGGCG
CAGCTGGGGT TTGCCAATGC GGTGGCCACG CTGGGCACGG CGTGCACGCC GACTCACGTG
CAGAAGCTGC TGCGGCAGGT CGACACTGTC ATCTTCTCGT TTGATGGAGA TAGCGCCGGG
CGCCGCGCCG CACGTCGTGC GCTCGAAGCC TGCCTGCCGC ACGCCACCGA CAACAAGACC
ATCAAGTTCC TCTTCCTGCC CGCCGAGCAC GATCCGGACA GCTTCGTGCG CGAAGAGGGC
ACCGAGGCCT TCGCCCGTGA AGTGCACAAC GCGATGCCGC TGTCGCGCTT CCTGCTCCAG
GCGGTGACCG AAGATCTCGA CCTGCGTCAA CCCGAGGGCC GTGCCCGCGC CCAATACGAG
GCCAAGCCGC TGCTGAGCGC CATGCCCGCC GGCGGCCTGC GCCTGCAGAT TGTGCGCGGC
CTGGCCGACA TGACAGGCAC CACGCCTGCC GACATCGAAG CGCTATGTGG CCTTCGCAGC
GACCCGGCCC AAGCGGGCCG CATGACGCAA AAGCGGCCCC GCGTGGCGCG CACCGCACCT
ACGGCGCTTG AGCAGAAGGT GTTGCGCCTG CTGATGCGCT ATCCCGCGCT GGCCGCTCGG
CTCGACGCCG ATGCCCGCGC CCAGTTGACA GCGCCGCAAT TGCCCCAAGG TGAGGTATTG
GCGGCGCTGC TGGGCGAATG CGATGCTGTG GGTCCGGAAG TGCACTTCGG CGCCTTTGTT
GAGCGCTTGG GGCAGACGCC CTATGCCGAG GCCTTTGCCG GGCTGCGCAC GGCTGTGCTC
CAGGACGACA TCGAACTGGA GCCGGCCATG TCCGAATTCG ATACTGCCGT ACAAAAGATG
CTCGCCGAGC CGCTCAAGCG CGAGCTGGAG ATGTTGCAGC GCAAGATGGA AGCCGGCCAT
GCCGGCGACG ACGACAAGGA GCGCATGCGC TGGCTGGTGG GCGAAATCAG CCGCCGCCGA
CAGCTCGTGT AG
 
Protein sequence
MIPQPFIDDL LNRVDIVDVV GRYVQLKKGG ANFMGLCPFH NEKSPSFSVS PTKQFYHCFG 
CGAHGSAIGF LMEFSGQSYV EAIKDLAQSV GMVVPEERGG LPPAARAEQQ AKTVALGDVM
ARACDHYRKQ LRSAPNAIQY LKGRGLTGEI AAHFGLGYAP DDWQSLEAVF GPYREDATAA
PLIEAGLVIE SEKTGADGSH RRYDRFRDRI MFPIRNTKGV VIGFGGRVLG QGEPKYLNSP
ETPLFSKGTE LYGLFEARNA IREFDYVLVV EGYMDVVALA QLGFANAVAT LGTACTPTHV
QKLLRQVDTV IFSFDGDSAG RRAARRALEA CLPHATDNKT IKFLFLPAEH DPDSFVREEG
TEAFAREVHN AMPLSRFLLQ AVTEDLDLRQ PEGRARAQYE AKPLLSAMPA GGLRLQIVRG
LADMTGTTPA DIEALCGLRS DPAQAGRMTQ KRPRVARTAP TALEQKVLRL LMRYPALAAR
LDADARAQLT APQLPQGEVL AALLGECDAV GPEVHFGAFV ERLGQTPYAE AFAGLRTAVL
QDDIELEPAM SEFDTAVQKM LAEPLKRELE MLQRKMEAGH AGDDDKERMR WLVGEISRRR
QLV