| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1919 |
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| Symbol | |
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| ID | 6289866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2024277 |
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| End bp | 2025389 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642625483 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_001899486 |
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| Protein GI | 187928999 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.338974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0110313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATC GCATCAAGCA TTATAGCCCA AGCCCTGTGT CAGACGACGC ACTGGCTGAC
GTTTCCCTCA CTGCGCCGGA GACGGAAGAC GCCCTCGATG ATGAGGCGCT CGATTTGCCT
GCCGCCGGTG CGGGCCAGGC AGCCGAGCCG ATCATCATAG AGATTCCGGA AACCATGCAC
GGCGAACGCC TGGACAAGGC GCTTGCCAAG CTGCTGCCCG ACTATTCGCG CAGCCGCCTC
CAGCAATGGA TTGATGCCGG CGCGGTGCGC CTGCGTGGTG AGGTGGTGCG CCCGCGTGCG
GCGATCTCCG GCGGTGACCG CATCGAAGTC GTCCCGCAAC GCGCGGCCGA CGAAAACGCC
TTCGTCGCCG AGCCCATCGA CCTGGATGTG GTGTACGAAG ACGACACGCT GCTCGTCATC
AACAAGCCTG CCGGGCTGGT GGTGCATCCC GCCGCGGGCA ACTGGAGCGG CACCGTACTC
AACGGCCTGC TGCACCGCTA TCCCGACGCC GTAGAGTTGC CGCGTGCCGG CATCGTTCAC
CGCCTCGATA AAGACACTTC CGGCCTGATG GTGGTCGCCC GTACGCTGCC TGCGCAGACC
GACCTCGTGC GCCAATTGCA GGCACGTACC GTCAAGCGGA CTTATCTCGC GCTGGTGTGG
GGCGAAACGC CGGAAGAAGC CACGATCGAT GCTCCGATCG GCCGCGATCC GCGTGACCGC
ACGCGCATGG CCATCATCGA GACAGCCAGC GGCAAGCCGG CGCGCACGCA TTTCAAGACG
CTTGACGTGG TGGACCTCGG GCGCGCACAG GTGTCGCTGG TGCGTTGCCA GCTCGAGACC
GGCCGTACAC ACCAGATTCG TGTGCACTTT GAATCGGAGG GGCATCCGTT GCTTGGCGAT
CCGGTCTACA CGCGCAACTT CCGACGTGGC CAGCCGCAGA CGATCAAGGC GCAGTTGCCG
GTGCCTTTTA CGCGGCAGGC GCTGCATGCA GTGCGCCTGG GGCTCGTGCA CCCAGCATCG
GGCAAATCGG TGCACTGGGA AGCCGGCGTG CCCGACGATT TTGCCGATCT GCTGGAAGCT
CTCGACCTGG ACCCCGATGC CGATGTCAAC TGA
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| Protein sequence | MKNRIKHYSP SPVSDDALAD VSLTAPETED ALDDEALDLP AAGAGQAAEP IIIEIPETMH
GERLDKALAK LLPDYSRSRL QQWIDAGAVR LRGEVVRPRA AISGGDRIEV VPQRAADENA
FVAEPIDLDV VYEDDTLLVI NKPAGLVVHP AAGNWSGTVL NGLLHRYPDA VELPRAGIVH
RLDKDTSGLM VVARTLPAQT DLVRQLQART VKRTYLALVW GETPEEATID APIGRDPRDR
TRMAIIETAS GKPARTHFKT LDVVDLGRAQ VSLVRCQLET GRTHQIRVHF ESEGHPLLGD
PVYTRNFRRG QPQTIKAQLP VPFTRQALHA VRLGLVHPAS GKSVHWEAGV PDDFADLLEA
LDLDPDADVN
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