Gene Rpic_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1001 
Symbol 
ID6288215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1059044 
End bp1059856 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content63% 
IMG OID642624569 
ProductInositol-phosphate phosphatase 
Protein accessionYP_001898581 
Protein GI187928094 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.165549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0783515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCGA TGCTCAATAT CGCCGTCCGG GCTGCTCGCA AGGCCGGCAC CGTCATCAAC 
CGCGCGTCCT TCGACGTTGA TAGCCTGCGC ACCGAGCGCA AACAACACAA CGATTTCGTC
ACCGAAGTCG ATCGTGCAGC GGAAGCGGCG ATCATCGAAG TCATCAAGAC TGCCTACCCC
GATCACGCGA TTCTAGCGGA AGAGTCAGGC CAATCCTGGG CCGACGGCGA AACCGCCAGC
GAAAACGTCT GGGTGATCGA CCCGCTGGAC GGCACGACCA ACTTCATCCA CGGCTTTCCG
CAATATGGTG TGTCGATCGC GCTGATGCAG CGTGGCGTCG TCACGCAGGC CGTGGTGTAC
GACCCGACGC GCGACGAACT CTTCACCGCC TCCAAGGGCG CCGGCGCGTT TTTGAACAAC
CGCCGTATCC GCGTCACGCG CCGCGACAAG CTGGCTGACT GCCTGATCGG CACGGGCTTC
CCCTACCGCG ATCTGGAAGG CCTGTACGAC TACACCCGCC TGTTTGCGAC CATGACGGAA
AACTGCGCCG GCCTGCGTCG CCCAGGCGCT GCCGCGCTGG ACCTCGCCTA CGTCGCCTGC
GGCCGCCTCG ACGGCTTCTT CGAGCAAGGC CTGAGCAAGT GGGACATGGC CGCAGGCTCG
CTGCTCGTGA CGGAATCGGG TGGCCTGGTG GGCAACTACA CCGGCGAATC GGGCTATCTG
GACCAAGGTG AAATCCTGGC CGGCAACCCG AAGGCTTTCG TGCAGATGAT CAAGATCACC
TCGCCGTTCT CGCGGTCGAA GGCTGAAGCT TGA
 
Protein sequence
MHPMLNIAVR AARKAGTVIN RASFDVDSLR TERKQHNDFV TEVDRAAEAA IIEVIKTAYP 
DHAILAEESG QSWADGETAS ENVWVIDPLD GTTNFIHGFP QYGVSIALMQ RGVVTQAVVY
DPTRDELFTA SKGAGAFLNN RRIRVTRRDK LADCLIGTGF PYRDLEGLYD YTRLFATMTE
NCAGLRRPGA AALDLAYVAC GRLDGFFEQG LSKWDMAAGS LLVTESGGLV GNYTGESGYL
DQGEILAGNP KAFVQMIKIT SPFSRSKAEA