| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0564 |
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| Symbol | |
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| ID | 8018190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 594607 |
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| End bp | 600645 |
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| Gene Length | 6039 bp |
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| Protein Length | 2012 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644829343 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | YP_002980541 |
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| Protein GI | 241662181 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.472069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCATC AATCTGCCGC CGAGCCCGCC CAGTCCCATC CTGCCTCGCT TGAGGCGACC
GGGGGCCCCG CGGTTCGTCC GAAAGCCGCC GTGCCCGCAC GTGATCTCTC CGCGCTGGCG
TGGGTTGCGC CCAACATGCG CGCCGCGCTC GACGATGCCG TGCGCGAGTT CGGCGAATAC
GCAGCCGATG TCATCGCCGA TCCGGAGGTC ATCGGTGCGC GCGATACGAC ATCGCTGCGC
CTCGCCGGCC AATATCTGCA CCAGGCTGCC GGCGCGTTGC TGATTGTCGG TCTGCGCGGT
GTCGATGTGT ATTGCCAGGC CGCCAAGCGC TTGCTTGAGG CAGTGGATGC CGGCACCGTC
GCCGCCGACG CCCAGACGCT GGATGTGTTC TCGCGCGCCG TGCAGGCGTT GCAGGAATAC
GTGGCCGACC TGATGGCCGG TATGGGCGAA GAGCCGCTGC GCCTGTTCCA GCCGTATCAA
GCCGTGCTCA CCCGCCTGGG CGAAGAGCGC ATCCACCCGG CCGACCTGTG GGCCGATGAG
TTGCGCCACC TGCCAGCGTT GCTGCTGCCC TCGCGCGACC TGCCGGGACT GGCGCGCCTG
CGCCGCAAGT TCGAACTCGC GTTGCTGACC GCGCTGCGGG CGCCGGCCTC CAACGCCGAC
GGTGCGGTGG TGGATCCGTC TGCCGCCGCA GCAGCCTACG CGCCACTGGA AGACATCCTG
CATGGCATCC GCGCGCTTGA GCGTGAACCG CGCCGCGCCG GGGACGATCT GCACCGCGAT
CTGTGGCTCG TGCTGGCCCT GACCTTTGGT GCCCTGCGTG CTGGCCTGGT GCCGGCCGAC
ATGACCGCCA AGCGCCTCGC CGCACGCGTC AACCTGCTGC TGCGCCAGTA TTCGCACAAC
AATGTCCATC TGCCGCAAGG CCTGCTGACC GACGCGCTGT ATTTGCTGGC CGGCATGGCG
TACAGCAACG CGCCGGCGAC GCCGGTGGGC GACGACACGC TCGGCCCGGA CATCGTGGCG
TGCGTGCAGG CCTTTGCGAT TCCACCCACG CACGCGCCTG CTGGCGCACT GCACACGCGC
CAGTACTACG CGCTGCTGCC GACCGACGCC AGCGACACGC TGCAACGCGT CGGCCGCTCA
CTCGAAACAC TGAGCCAACA ACCTGCGCCC GCTGCGGACG AACTCGACGC TGCACTGCAG
ACGCTGGCGC TGCATGCCGA TGCGCTCGGT CAGCCGGCGC TGTCTGAGCT GTCGAATCGC
CTGACCGAAG CCGCCGGGCA GGACGTTGCC CCTACGCTGC AATTCCTATC GCGCATGCTG
GCCCGCCCGT GGGCGCTGCA TGGTGAATCC GGCGATTTGC GCAGCGCGTG GTTTGCCGCT
CGCTGCAGTG AATTGGCCGA ACACGCCCGC GTCGCGCAAG ACGGTCAGGC TGTGCCGGCA
CCTGCATGGC TCACGCTGCT GGCCGGAGAA GCTGCGCAAC GCCGCACGCG TGCTGAACAG
GTTCGCGCAC TGCAAACGCA GCTGGCGTCC GCCGAAACGC ACCTCGATGC TTTCGAGCGC
GAAGGCGAAG AAAGCGGCGG CCTCCAGGAA GCCGCCCGTC TGTTCGGCGA GATGCAAAAT
GCCTTTGCCG CCCTGGACGC CTATGAGGCG GTGCATGCCA CCGAAGCTGC GCAGTCGACC
ATCAACGCTC TACAAGCTGC GGGCGAAGGC GCAACCGCCG ATCGCGAACG CTACCTGGCC
GCGCTGGCCG CCAACGTCAG CGGCCTGCAG GCCCTGCTGG ATGCACTCTC TGCCGGCACA
GAATTGACCG GTGGCCAAGT CGACGAGATC GTCATCGAAG GCCGGTTGAC GCCGAATGCG
CGCGAGACCG CATGGCGCGA GTTCGTCTTC GATACCGAAT CCGGCATGCT GGCCCGCCGC
GAGCCGCAGT CCGAAACGCA GTCCGGCGCA GACGCGGCCA ACGCCGATGC GGCGTCGCCG
CTGCAATCGT TGCTCGATCG CCTGCTCGCC AAGCAACCGG TCGACCCGAC CGACCCGCTG
GCTGCGGAGC TGCGCACCGC GCTGCAGGAA GCGCGCGATG CCGCCGCCAT CGACGACGAT
CCGGCTCGCC GACGCCGCCT GGAAGAGGCG CTGGCCCAGT TCGATGCATG GCAGGTGGGC
AGCCCCGGCG CGCTTGAGCG GATGCAGGCG GCATTGGCTG CACCGGTTGC CGCGCCTGCG
GCCGCCGCAC CTGCGCCAAC TGCCGCACGG GATACCCAAT CCATTGATGC CGAGCTGCTC
GACATCTTCC TGTCTGAAGC CGAAGAAGTG CTGGCCGGCG TGCGCGCCGA CCTGCAGGGT
CTGCAGGCCG CTGCCGACAT GGGCACGGGC GGTCTGGCTG CCGGTTCGGA CCTGGACTTG
CTTACGCAGC TGCGGCGCGC GTTCCATACG CTCAAGGGCT CGGGCCGCAT GGTCGGGCTC
ACGCGCTATG GCGAAGCGGC CTGGGCCATC GAGCAGGTGA TGAATGTCTG GCTGGCCGAG
AGCCGTGTGC CGACGTCTGA CCTGGCCGCG CTCCTCACGC GCGCCGAGTC CGAGTTGTCG
ACGTGGGCCG CTGCCATCGC GCAATCGCCC CAAGCCGATC ACGCCATCGA ACCGCTGGTC
GCCGCCGCAG AGCGCGTGCG CCATGGCGGC CCATTCGTGT GGCTGGAGGC CGTGCCGGCG
TCTGAGCCAG CGAAAGGTGC TCCGGCCGCT GAATACGCGG AGCCGCATCC GGTGGAAGCG
CCGGCGGCTG AAACCGCATC GCACGACGCA GTCGCTGAAC CGTCGTTGGA ATTGGCCGCG
CCGGATGCCC CCGTTGCTGA AGCCGCAGAC CCGGTCGCGC TCACGTGGGA CGACGAACCA
GCGGAGCCTG AAGCCGAGGC GCCGGTGTCC GACGCCACCG CACCGGTGGT AGAGCATGAC
GCAGTCGAGC CGGTTGCAGA GCACGTTGAA GAGGCGCATC AGGAAGCCGC CGCTGAACCG
GTTGCCGCCG ATTCCGACGC CAAGGTGATC CCGTTCCCGT TCGCGCAGAC CGGCGAGCCG
GAAGAGGTAC CGCACGACGA TGGTGTAAAG GAGATTGGTC CGGTCCGCAT CAGCGTGGCG
CTGTACAACG TCTACCTGCA GGAAGCCGAT GATCTGATCC GCCGCCTGGG TGTGGATTTC
TCGGAGTGGC GCCACGAAGG CCGCACGCCG CCGAGCGAGC TGGCCCTGCG CGCCGCGCAC
ACGCTGCAAG GCAGTTCCGC CGTGGTTGAG CTGGAGCCCG TGCGCCAGTT GGCTGGGGCG
CTGGAGCAGG TGCTGTTGAA CCTGAACAGC CGGCCGGTGG CCATGCATCC GGGCGACTTC
CGCTTGCTCG ATCAAGCCGT CGAGCGCATG CGCGGCATGC TGCATCAATT TGCCGCCAGC
CTGTGGCCGG ACACTGACGA GCCGCTGCGC CGCAGCCTGG ACGAGCTGTG CGAGCGCCTG
CTCGTGCGGC CGCGCCTGCC GCTGGAGCCG GCACCCGCTG CCTTCTCCGA AGCCGAACCG
GCCGAGAATG AAACCGCCGG TTCGGCTGGC GAGCCCGAGT TTGACCCGGC ACCGGTTGCG
CCGACGTTCG TGCCGGTGCA CGAGTCGCCG GTTGTCGAAC CTGCTGTGGG TGAACTGGTC
CGCCAGGCGC CGGCAGACGC GCTCGACCCG GCGCTGCTTG AGATCTTCCT GGAAGAAGCG
CACGTCGCGC TGCCCGAGCT GGGTCAGCAT CTGCGCGCTT GGGAAGCCGC GCCGCAAGAC
CGCAATGCCG CCGGCCTCCT CCTGCGCAAC CTGCACACCG TCAAGGGCAG TGCGCGCATG
GCGGGTGCCA TGACGCTGGG TCAGGCCGCG CACGAAATGG AAAGTGCCAT TGAAGGCGGC
CTGCGGCAGA ACCGCGTGGA CGACGCGCTG TTCCGCAAGC TCTACGTCTG GTTCGACCGC
ATTCAAGCGC ACGTCGATGC GCTGGGCGCG GGCAACCTGC TGCCGCTCGA TGCCGGCCTT
GCCGATGCCG CCGATGCCAC GCAGGCATCG TCCGAAACGC AGACGCCGTC CGGTACGTCG
ATGCTGCCGG CCATGGCCAC CACCAGCGTC GATTTGGCCG GCACGCGCAG CCCCGAAGCC
GAGGCGCTGG AAGTGGCCGA ACGCCAGCGC GCGATGGTGC GGGTGCAGGC GCGCGCGCTC
GATTCGCTCA TCAACGATGC GGGTGAAGTC GGAGCGGCGC GTGCGCGCCT TGAGTCGGAA
GTCGATGCGC TGAAGACCTA TCTGTCGGAA CTGAACGACA ACGTGGCGCG TTTGCGCTCG
CAGGTGCGTG AGATCGAAAT CCAGGCCGAA ACGCAGATGG AGTCGCGCAT TGCCGATGCG
GCTGCGCACG ACGAGTCGTT CGACCCGCTG GAGTTCGACC GATTCACGCG CTTGCAGGAA
CTCACGCGGA TGATGGCCGA GTCCGTCAAC GACGTGGCGA CGGTGCAGCA GAACTTGTTC
CGCGGTTTCG ATCAGGCATC GCTCGATCTG GAAACGCAGG CGCGCCTCAC GCGCGGTCTG
CAGCGCAGCC TGATGCGTGC GCGCATGGTG CAGTTCGATA CCGTGGCCGA CCGTCTGTAT
CGCGTGGCGC GCCAGGCAGC AGCGGAAACC GGCAAGGAAG TCCGGCTGTT CATCAAGGGC
GGTACGGTAG AACTGGATCG CAGCGTGCTG GACCGCATGG GCGGCCCGCT GGAACACATG
ATTCGGAATG CGGTTGCGCA CGGCATTGAA TCGGCCGACG AGCGCCGCGC CAAGGGCAAG
GCACCCGCCG GTGAACTGAC GCTGGAAGTG CAGCAGGAGG GTAACGAAGT CGTGCTGCAC
TTCGTCGACG ACGGCGCGGG CCTGAACCTC GATCGCATCC GCGCGCGTGC GTTGGAGCGT
CAACTGCTGG CTGCTGACGA AGAAGCCAGC GACGCGCGCC TCACCGAGAT GATCTTCACG
CCGGGCTTCT CCACGGCCGA TCAGGTGTCG GAACTGGCCG GCCGCGGTGT CGGCATGGAC
GTGGTGCGCG CAGAAACCGT CGCCTTGGGC GGCCGGATCT CGCTGCAGAC CACGCCGGAA
GTCGGTACGC GCTTCACCAT CCACCTGCCG CTGACCACTG CGATTACGCA GGTGCTGCTG
GTGCGTGTGA GCGAGCGTGT GTACGCGATT CCGTCGGGCA TGATCGACCA CGTGCAGCAA
CTGCGCCCGC AGGCGCTGGC CGAGGCGTAC AACGCCGCCG CGCTGCAACT GCCGACGGGC
CCCGTGCCGT TCCACTACTT TGGTGCGCTG CTTGAAGAAG CGACGTCTGT CACAAGCGGG
CGCAAGTACT CGCCGGCCGT GGTCGTGCGC AACGGTGCTG ACCGCGCCGC CGTGCATGTC
GATGAAGTGA TCGGCAACCG CGAAGTCGTG GTCAAGCACA TTGGCCCGCA CCTTGCGCGT
CTGGAAGGTA TTGCCGGTGC AACGACGCTG GGCGACGGCG AGATCGTGCT GATCTACAAC
CCTGTGGTGC TCACGCAGCG CTTTGAGCGC GAAGCGGTTG CACGCAGCCT GTCAGACCCG
GAAGCCACGG GCGCCGTGGC CGAACTGCAG CGCGACGGCA GCACCGACGC CGTGCCGGGC
CTCGCCACAC AGCCGATCGT CATGGTGGTC GACGATTCGC TTACGGTGCG CAAGGTCACG
CAGCGTCTGC TTACGCGCTC CGGCTACCAG GCCGTGCTCG CACGCGACGG TGTGGATGCG
CTGCGTCAGT TGCAGGAGAT CACGCCCGAC GCAATGCTCG TCGACATCGA AATGCCTCAC
ATGGATGGTT TCGACCTCAC ACGCAATGTG CGTGCGGACG AACGTATCGG CGCCACGCCA
ATCATCATGA TCACCTCGCG TACGGCGGAC AAACACCGCC GATACGCAGC GGAGATCGGC
GTGAACGTCT ACCTGGGCAA GCCGTACAAC GAAGAGGAGT TGCTCCAGCA TCTGCGCAAC
CTCATCGGCG AGCGCGCACC GGCGGCCAAG GCAGGCTGA
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| Protein sequence | MRHQSAAEPA QSHPASLEAT GGPAVRPKAA VPARDLSALA WVAPNMRAAL DDAVREFGEY
AADVIADPEV IGARDTTSLR LAGQYLHQAA GALLIVGLRG VDVYCQAAKR LLEAVDAGTV
AADAQTLDVF SRAVQALQEY VADLMAGMGE EPLRLFQPYQ AVLTRLGEER IHPADLWADE
LRHLPALLLP SRDLPGLARL RRKFELALLT ALRAPASNAD GAVVDPSAAA AAYAPLEDIL
HGIRALEREP RRAGDDLHRD LWLVLALTFG ALRAGLVPAD MTAKRLAARV NLLLRQYSHN
NVHLPQGLLT DALYLLAGMA YSNAPATPVG DDTLGPDIVA CVQAFAIPPT HAPAGALHTR
QYYALLPTDA SDTLQRVGRS LETLSQQPAP AADELDAALQ TLALHADALG QPALSELSNR
LTEAAGQDVA PTLQFLSRML ARPWALHGES GDLRSAWFAA RCSELAEHAR VAQDGQAVPA
PAWLTLLAGE AAQRRTRAEQ VRALQTQLAS AETHLDAFER EGEESGGLQE AARLFGEMQN
AFAALDAYEA VHATEAAQST INALQAAGEG ATADRERYLA ALAANVSGLQ ALLDALSAGT
ELTGGQVDEI VIEGRLTPNA RETAWREFVF DTESGMLARR EPQSETQSGA DAANADAASP
LQSLLDRLLA KQPVDPTDPL AAELRTALQE ARDAAAIDDD PARRRRLEEA LAQFDAWQVG
SPGALERMQA ALAAPVAAPA AAAPAPTAAR DTQSIDAELL DIFLSEAEEV LAGVRADLQG
LQAAADMGTG GLAAGSDLDL LTQLRRAFHT LKGSGRMVGL TRYGEAAWAI EQVMNVWLAE
SRVPTSDLAA LLTRAESELS TWAAAIAQSP QADHAIEPLV AAAERVRHGG PFVWLEAVPA
SEPAKGAPAA EYAEPHPVEA PAAETASHDA VAEPSLELAA PDAPVAEAAD PVALTWDDEP
AEPEAEAPVS DATAPVVEHD AVEPVAEHVE EAHQEAAAEP VAADSDAKVI PFPFAQTGEP
EEVPHDDGVK EIGPVRISVA LYNVYLQEAD DLIRRLGVDF SEWRHEGRTP PSELALRAAH
TLQGSSAVVE LEPVRQLAGA LEQVLLNLNS RPVAMHPGDF RLLDQAVERM RGMLHQFAAS
LWPDTDEPLR RSLDELCERL LVRPRLPLEP APAAFSEAEP AENETAGSAG EPEFDPAPVA
PTFVPVHESP VVEPAVGELV RQAPADALDP ALLEIFLEEA HVALPELGQH LRAWEAAPQD
RNAAGLLLRN LHTVKGSARM AGAMTLGQAA HEMESAIEGG LRQNRVDDAL FRKLYVWFDR
IQAHVDALGA GNLLPLDAGL ADAADATQAS SETQTPSGTS MLPAMATTSV DLAGTRSPEA
EALEVAERQR AMVRVQARAL DSLINDAGEV GAARARLESE VDALKTYLSE LNDNVARLRS
QVREIEIQAE TQMESRIADA AAHDESFDPL EFDRFTRLQE LTRMMAESVN DVATVQQNLF
RGFDQASLDL ETQARLTRGL QRSLMRARMV QFDTVADRLY RVARQAAAET GKEVRLFIKG
GTVELDRSVL DRMGGPLEHM IRNAVAHGIE SADERRAKGK APAGELTLEV QQEGNEVVLH
FVDDGAGLNL DRIRARALER QLLAADEEAS DARLTEMIFT PGFSTADQVS ELAGRGVGMD
VVRAETVALG GRISLQTTPE VGTRFTIHLP LTTAITQVLL VRVSERVYAI PSGMIDHVQQ
LRPQALAEAY NAAALQLPTG PVPFHYFGAL LEEATSVTSG RKYSPAVVVR NGADRAAVHV
DEVIGNREVV VKHIGPHLAR LEGIAGATTL GDGEIVLIYN PVVLTQRFER EAVARSLSDP
EATGAVAELQ RDGSTDAVPG LATQPIVMVV DDSLTVRKVT QRLLTRSGYQ AVLARDGVDA
LRQLQEITPD AMLVDIEMPH MDGFDLTRNV RADERIGATP IIMITSRTAD KHRRYAAEIG
VNVYLGKPYN EEELLQHLRN LIGERAPAAK AG
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