| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3393 |
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| Symbol | |
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| ID | 6411067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3631744 |
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| End bp | 3633375 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713273 |
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| Product | protein of unknown function DUF935 |
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| Protein accession | YP_001992370 |
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| Protein GI | 192291765 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4383] Mu-like prophage protein gp29 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.219922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACG CCCCGATCAT CTACGGTCCC GACGGCCAGC CTATCCGTCG CGAGGTCCTG
ACCGCCTCTG TCGCCGGTCC GACCGTCACC GGCGTGCGCT CGCCGTTCGG CGCCTATCCG
GCCGACGGGC TTAATCCGCG GCGACTGGCC TCGATCCTGC GCGAGGCCGA TCAGGGCGAC
CCGATCAGTT ATTTCGAGCT GGCGGAGCAG ATCGAGGAAC GAGACCCGCA CTATCTCGGC
GTGCTGTCGA CGCGCAAGCG CAGCGTCTCT CAGCTCGATA TCACAGTGGA ATCGGCCGAC
GATACGCCCG AAGGAAAGTC GATCGCCGAC ATGGTCGAGG CCTGGCTGCG GCGCGACGAA
TTGCAGTTCG AGCTGTTCGA CATTCTCGAC GCGATCGGCA AGGGCTGGAG CCAGACCGAA
ATCATCTGGG ACACATCCGA GGGCCAGTGG CAGCCGAAGC GGCTGGAGTG GCGCGACCCT
CGTTGGTTCA GGCCGGATCA GCGCGACGGT GTGACGCCGC TACTGCGGAT CGACGCCGGC
GACGCCTTCG CGCAGGGGCT ACCACCGGCC GGACCGAACG GCGGCGGCTA CGCGCCATTG
CCGCCGTTCA AGTTCATCTC GGCGGTGATC CGTGCCAAGA GCGGCCTTCC GGTCCGCTCG
GGCCTCGCGC GGCTGGCGTG CTGGTCATGG ATGTTCAAGG CGTTCACGCA GCGTGATTGG
GCTGTGTTCA CGCAGACGTT CGGCCAGCCG GTGCGGGTCG GCAAGTATCC GGCTGGATCG
TCCGAGAAGG ACAAGGACAC GCTGTTCCGC GCCGTCGCCA ATATCGCCGG CGACTGCGCG
GCGATCATTC CGGAATCGAT GCTGATCGAG TTCATTGAGT CCGCAAACGT CGGTTCAAGC
CATCAGCTCT ACAAGGAGCG CGCGGACTGG CTCGATCAGC AGATGTCCAA GGCCGTGCTT
GGCCAGACCG CCACCACCGA CGCGATTGCC GGCGGCCACG CGGTCGGTCA GGAGCATCGG
CAGGTGCAGG AGGATATCGA GACCGCCGAC GCGAAGGCGC TGGCGGCGAT CATCAACCGC
GACCTCGTGC AGTCCTGGGT GCAGCTCGAA CACGGGCCGC AGAAGGTCTA TCCGCGCCTG
CGGATCGGCC GGCCAGAGAG CAAGAACGTG ACGCAGATCC TCGACGGTAT CAGCCGCGGC
GTGCCGATGG GGATGGCGGT CGAAAAGAGC TACATGAACG ATCTGCTCGG CATCCCGGTG
CCAAGCCCCG GCGCGGACGG CCGCATGCCG GAGCTGCTGA CGCCCTCGGC GTCGGCGTCG
CCGTTCGGAT CGATGTTTCC CTCGGCATCA CCTCAGCAGC GCGCGCTCGC TGCGGCCGAG
ATGATCATGC ACGACGTGCG CGATCCGATC GCTGTGCTAT CCGATCAGGC CGCACGACTA
TGCGCGCCGG GAAGCGATGC GCTGGTCGAC GAAGTGCGCG GCGTGATCGA AACATCGACG
TCGCTGCAGC AGGTGCAGGA GAAGCTGCGC GCGCTGAAGC CGGGCGCCGC CGAAGCACAG
ATGGCCGGGC TGATGCGGAT GGCGCGGGTG ATCGCGAATC TGACCGGCCG CGCCAGCATT
CCCGATGCTT AA
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| Protein sequence | MADAPIIYGP DGQPIRREVL TASVAGPTVT GVRSPFGAYP ADGLNPRRLA SILREADQGD
PISYFELAEQ IEERDPHYLG VLSTRKRSVS QLDITVESAD DTPEGKSIAD MVEAWLRRDE
LQFELFDILD AIGKGWSQTE IIWDTSEGQW QPKRLEWRDP RWFRPDQRDG VTPLLRIDAG
DAFAQGLPPA GPNGGGYAPL PPFKFISAVI RAKSGLPVRS GLARLACWSW MFKAFTQRDW
AVFTQTFGQP VRVGKYPAGS SEKDKDTLFR AVANIAGDCA AIIPESMLIE FIESANVGSS
HQLYKERADW LDQQMSKAVL GQTATTDAIA GGHAVGQEHR QVQEDIETAD AKALAAIINR
DLVQSWVQLE HGPQKVYPRL RIGRPESKNV TQILDGISRG VPMGMAVEKS YMNDLLGIPV
PSPGADGRMP ELLTPSASAS PFGSMFPSAS PQQRALAAAE MIMHDVRDPI AVLSDQAARL
CAPGSDALVD EVRGVIETST SLQQVQEKLR ALKPGAAEAQ MAGLMRMARV IANLTGRASI
PDA
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