Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0588 |
Symbol | |
ID | 6408238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 640334 |
End bp | 641557 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642710501 |
Product | chromate transporter, chromate ion transporter (CHR) family |
Protein accession | YP_001989623 |
Protein GI | 192289018 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2059] Chromate transport protein ChrA |
TIGRFAM ID | [TIGR00937] chromate transporter, chromate ion transporter (CHR) family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.263065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCGCGC AGCCCAAGCC ATTGACCACC CAGCAGCCAC GCAGCGGCAC GCCGCGCGAA GTGCTGGGAG TGTTCTTCAA GCTCGGGCTG ACCTGTTTCG GCGGTCCGAT CGCGCATCTC GGATACTTCC GCGACGAATT CGTGGTCCGG CGAGGCTGGC TGGACGAGCA GAGTTACGGT GATCTCGTCG GGCTGTGCCA ATTCCTGCCC GGCCCCGCCA GCAGCCAGGT CGGGTTCGCG ATCGGCCTGC TACGCGCCGG CTATCTCGGC GCGCTCGCCG CCTGGACCGG CTTCACGTTG CCGTCGGCGC TCGCGCTGGT GCTGTTCGCC TATGGCGCAG CGGCGCTCGA CGGTGCGGTC GGCACCGGCC TGCTGCACGG GCTGAAGCTG ACAGCGGTGG CGATCGTCGC CCAGGCGGTG TGGGGGATGT CGCGGCAGCT CTGCCCGGAT CGCGAGCGCG CCACGATCGC GGTGGCGGCG GCGCTGATCG TGCTCCTCAG CGCAATGCCG ATCGCTCAGC TCGGCGCGAT CGCACTCGGC GGGATGGCCG GGATGTTGTG GTGCCGAAGC GACGCGCTGC AGCACTTCGG CGACGTCGGC GCACGCGTCT CGCGGTCGGT CGGTGTCGCC GCGCTGCTCG GCTTCGTGAT GCTGTTGGTC GGCCTGCCCC TGATCACCCG CATCACAGAG TCGCCGATCG TTGCGGCGTT CGATGCGTTC TATCGCTCGG GCGCGCTGGT GTTCGGCGGC GGCCATGTGG TGCTGCCGCT GCTCCGCGAT GCGTTCGTCG GGCCGGGATG GGTGAGCGAC GACGCGTTCC TCGCCGGCTA CGGCGCGGCG CAGGCCGTGC CGGGACCGCT GTTCAGCTTC GCGGCCTATC TGGGAGCGAT CTCGGCACCT GCCGCGGGGC TGGCCGGCGC GGCGATCGGT CTTGTCGGCA TCTTCCTGCC CGGATTCCTG ATCCTGCTCG GCGTTCTGCC GTTCTGGCAC GGGCTGCGCC ACTATCCGGC CGCGCAGGCG ATGATGCGCG GCGTTAACGC CGCCGTGGTC GGCCTGCTCG GCGCCGCGCT GTACAGCCCG GTGTGGACCA GCACGATCCG CAGCACGGCC GACGTCGCGG TCACGCTGAT CGGCTTCGCG TTGCTGACGA TCTGGCGCGT CCCACCGCTG ATTGTCGTCG CCTTCAGCGC GGCGGCGGGA ATCGCCGGCG CACTGTTCGG CTAA
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Protein sequence | MIAQPKPLTT QQPRSGTPRE VLGVFFKLGL TCFGGPIAHL GYFRDEFVVR RGWLDEQSYG DLVGLCQFLP GPASSQVGFA IGLLRAGYLG ALAAWTGFTL PSALALVLFA YGAAALDGAV GTGLLHGLKL TAVAIVAQAV WGMSRQLCPD RERATIAVAA ALIVLLSAMP IAQLGAIALG GMAGMLWCRS DALQHFGDVG ARVSRSVGVA ALLGFVMLLV GLPLITRITE SPIVAAFDAF YRSGALVFGG GHVVLPLLRD AFVGPGWVSD DAFLAGYGAA QAVPGPLFSF AAYLGAISAP AAGLAGAAIG LVGIFLPGFL ILLGVLPFWH GLRHYPAAQA MMRGVNAAVV GLLGAALYSP VWTSTIRSTA DVAVTLIGFA LLTIWRVPPL IVVAFSAAAG IAGALFG
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