| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0401 |
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| Symbol | |
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| ID | 6408048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 429106 |
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| End bp | 430305 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710312 |
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| Product | radical SAM enzyme, Cfr family |
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| Protein accession | YP_001989437 |
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| Protein GI | 192288832 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.213699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCTT CTGCAGCCTC GGCCCTGGTC GAGAAGACCC CGCTGGAAAC CTATGTGCCG
CCGGCCAAGC CGTCGCTGAT CGGGCTGTCG CGGGCGCAAT TGTGCGACCG GCTCGGCGAC
GTCGGGGTGG CGCCGCCCCA GCGCAAGATG CGGGCGCAGC AGCTCTGGCA CTGGATGTAT
GTCCGCGGCG CCCGTGACTT CTCCGAAATG ACCAATGTCT CCAAGGAGAT GCGGGCAACG
CTGGCGGAGC ACTTCACGGT CGACCGGCCC GAAGTTGTGG CCGAGCAGAT TTCGGCCGAC
GGCACCCGCA AATGGCTGCT GCGGCTGCCG AGCGGCGGCG ACGGCCAAAA GGCTCACGAG
GTCGAGTGCG TCTATATCCC GGAGACCGAC CGCGGCACGC TGTGCGTCTC CAGCCAGGTC
GGCTGCACCC TGAATTGCGC GTTCTGTCAC ACCGGCACCC AGCGCCTGGT GCGCAACCTC
ACGGCCGGCG AGATCGTCGG CCAAGTGATG GTGGCGCGCG ACCGGCTGGG TGACTGGATC
GACCGCGAGA CACCGAACGG CAACCGCCTG ATCACCAACA TCGTGATGAT GGGGATGGGC
GAGCCGCTGT ACAATTTCGA TGCGGTGCGC GACGCGCTGC TGATCGTCTC CGACAATGAA
GGCATCGGCA TCTCGCGGCG GCGGATCACG CTGTCGACCT CCGGCGTGGT GCCGAACATC
AAGCGCACCG GCGACGAGAT CGGCGTGATG CTGGCGATTT CGCTGCACGC GGTGCGCGAC
GAACTCCGCG ACGAGCTGGT GCCGCTGAAC CGCAAATATC CGCTGAAGGA ATTGCTACAG
GCCTGCCGCG ACTATCCGGG CGCGTCCAAC GCTCGCCGCA TCACCTTCGA ATACGTGATG
CTGAAGGGCG TCAACGACTC GCTCGACGAT GCGCGCAAGC TGGTACAGTT GCTCAAGGGG
ATTCCGGCCA AGATCAATCT GATCCCGTTC AATCCATGGC CGGGCTCGAA CTACGAGTGC
TCGGACTGGG ACCAGATCGA GAAGTTCTCG GAATACGTTT TCAACGCCGG CTACTCGTCG
CCGGTGCGCA CCCCGCGCGG CCGCGACATT CTGGCGGCCT GCGGCCAGCT CAAATCCGAA
ACCGAAAAGC TCTCGGTGCG CGAACGCAAC GCGCTCCGCG CGATGGCGAT GACGGACTGA
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| Protein sequence | MTPSAASALV EKTPLETYVP PAKPSLIGLS RAQLCDRLGD VGVAPPQRKM RAQQLWHWMY
VRGARDFSEM TNVSKEMRAT LAEHFTVDRP EVVAEQISAD GTRKWLLRLP SGGDGQKAHE
VECVYIPETD RGTLCVSSQV GCTLNCAFCH TGTQRLVRNL TAGEIVGQVM VARDRLGDWI
DRETPNGNRL ITNIVMMGMG EPLYNFDAVR DALLIVSDNE GIGISRRRIT LSTSGVVPNI
KRTGDEIGVM LAISLHAVRD ELRDELVPLN RKYPLKELLQ ACRDYPGASN ARRITFEYVM
LKGVNDSLDD ARKLVQLLKG IPAKINLIPF NPWPGSNYEC SDWDQIEKFS EYVFNAGYSS
PVRTPRGRDI LAACGQLKSE TEKLSVRERN ALRAMAMTD
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