Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4336 |
Symbol | |
ID | 5211320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5451771 |
End bp | 5452454 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597920 |
Product | hypothetical protein |
Protein accession | YP_001278624 |
Protein GI | 148658419 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.145774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00399105 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGATA CTGTAGCCCT TCCAACGATA ACGCTCCGAT CTCTGGATGC AGGTTGGAAC TATGAGCGTT GGGAGCGCGA ACTTCCTGAT GACGGCAATC GCTACGAGGT GATCGAGGGC ATTCTGTACA TGACTACTGC ACCGGGTTAT TTCCACCAGT GGATCGTGCG TCGTCTGGAT CAATACGTCG GCGTGCCGCT GGAACAACAA GGGCTGGCAT ATGCCGCCAC TGCGCCGATT GGCGTGCTGA TGCCCGGTTG TGAGCCGGTA CAGCCGGATT TTGCGCTGGT ACGCCGTGAT CGCGCGGGCA TCATCAGCGA ACGCCGTATC CGCGGCGCCC CCGATCTGAT CGCGGAAGTG CTGTCACCAT CAAATCCTGA GCAGGACACG GTGATCAAAA GGCGCGTCTA CGCCCGTGCA GGCGTGCCCG AGTACTGGAT CATTCGCCCT GAAACGCGCG ATGTGCTGGT GTGTCGCAAC CCCGACGCCA CGCTCGGCGA TTATACATTC ACGCTGCTGG TCGGCGCTGC CGAAACCCTG TTGGCGCACC CGTTTCCGAT CAGGATGTCG GTATCGATGA TGATCAGCCC GCTCACGCTC TACGACCCCA TTCGCGCTGA CGCAGACTGC GTAGCCACGC AGTGCTATCC TGCATGTCCT CACGGTCTCG CCACATCCCG ATGA
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Protein sequence | MADTVALPTI TLRSLDAGWN YERWERELPD DGNRYEVIEG ILYMTTAPGY FHQWIVRRLD QYVGVPLEQQ GLAYAATAPI GVLMPGCEPV QPDFALVRRD RAGIISERRI RGAPDLIAEV LSPSNPEQDT VIKRRVYARA GVPEYWIIRP ETRDVLVCRN PDATLGDYTF TLLVGAAETL LAHPFPIRMS VSMMISPLTL YDPIRADADC VATQCYPACP HGLATSR
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