Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4087 |
Symbol | |
ID | 5211070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5124238 |
End bp | 5125248 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640597675 |
Product | glycosyl transferase family protein |
Protein accession | YP_001278381 |
Protein GI | 148658176 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.445004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.177761 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGCG TCAGTATTGT TATTCCATGC TACAACCTTG GCGAGTATCT GCAGGAAGCG CTCGATAGCG CACTGCAACA AACGCATGCC GATCTTGAGG TGATTCTGGT TGACGATGGT TCAACCGATC CCGCAACCAT ACGAACCATC GATCAACTTG CACCTCACCC GCAGCTGCGT GTTTTTCGCA CGCCTAATCA GGGAGTGGCG CGCGCCCGGA ACTATGGCAT TTCCCTGGCG ACAGGGGCGT ATGTCCTGCC GCTTGACGCC GATGATCGTA TTCTGCCGGA GTATGTTGCG CGTGCGGCTG CAATTCTCGA CGCCAATCCC GGAGTTGCGT TCGTCGGGTG TCACTATCGA ACGTTTGGCT TGCGTCAGTC CGAGTATCGG CCAGCAGCGT ATCGCTTACC GGACATGCTG GTTGAGAATG TCGCGCCGGT GACATCCCTG TTTCGTCGTT GCGTATGGGA AGAGGTGGGC GGCTACTGCC CGGAGTTGAA TAGTATTGAA GATTGGGACT TATGGATCGG TATGTTGGAG CGAGGGTATC GGGGTGAAGT CGTGCCCGAT ATTCTCTTCG AGTATCGTGT GCGCTCGAAC TCTAATCTTT CGCAGATTCG TCAACCAGAG TTATACCAGA AGCGTCTCCA GTTGCTCTAC GCACGCCACG CCGGGTTGTA TGAACAGTAT CGCGCAGAGG TGCTGGCGTT GAAGGATCTG CTCTTTGCCC ATCAACTTGC CTATACCCAC TGGCTCGAAG AGCAACGCTG CGCCTGGGAG CAGGTGGCAC AGGAGCGGTT GGAAATGATC ACGCGATACG ACCGGAATTG GGCCGTCCGG GAGCAGCGTC GCCAATGGTG GAGATATCAG ATCGGGCGCG TGCAGCGAGT CCTGGCGCAA CATCCCGATC CCATACATCG GATGCAGGCG CTGACAAAAG GAGGGCTGCG AGTTCTGCGG CGAAAACTGT CGCCATACCT GCAGCGCGTA TCGTGGAGAA AGGTCCTCTA G
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Protein sequence | MTRVSIVIPC YNLGEYLQEA LDSALQQTHA DLEVILVDDG STDPATIRTI DQLAPHPQLR VFRTPNQGVA RARNYGISLA TGAYVLPLDA DDRILPEYVA RAAAILDANP GVAFVGCHYR TFGLRQSEYR PAAYRLPDML VENVAPVTSL FRRCVWEEVG GYCPELNSIE DWDLWIGMLE RGYRGEVVPD ILFEYRVRSN SNLSQIRQPE LYQKRLQLLY ARHAGLYEQY RAEVLALKDL LFAHQLAYTH WLEEQRCAWE QVAQERLEMI TRYDRNWAVR EQRRQWWRYQ IGRVQRVLAQ HPDPIHRMQA LTKGGLRVLR RKLSPYLQRV SWRKVL
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