Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3938 |
Symbol | |
ID | 5210921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4927895 |
End bp | 4929484 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640597533 |
Product | FHA domain-containing protein |
Protein accession | YP_001278240 |
Protein GI | 148658035 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCCG CATCCCATCA GACGCAGTCG CTCTGTCCTG TCTGTGGCGC GCCTCAGCCG GGCGCCGCCC GATTCTGCTC ACGCTGCGGT CATCCGCTGA CCCAACCGCC TCAGACATTC GAGATGCTGG TTACCCAGAA CAACGCCCCA CCGATGCGCG TACCCATCCC CGCCGCAACC GTTACCATCG GTCGGGCGCA CGACAGCACC ATCCTGATCA GCGATCCAAA GGTTTCACGA CGCCATCTGC AACTGACCTG GAACGGCGCG GCGTTCGTCG CTGAAGATGT CGGCAGCAGC GGCGGGACGC TTCTGAACGG CATGCCGTTG CGCAGCCCGA CGATCCTGCG TCCGGGAGAC ACGCTTTCGA TTGGAGATAC CATCCTGCGG TTGGAGATCG CGTCAGGCAC AGCAACCGTG CTGGCGCCTC CGCGTGAACA GGCGCCCTCT GTGCCGCAGA CGCCGACCAC GCCCGCCCAT CTCCAGCCAC CTGCATCTGC ATCTGCGCAA CCTGCTGCAC TGCCGCCCTA TCAACCGCCT GCATCTGCGC AACCTGCTGC ACCGCCACCT TATCAACCAC CCGCATATGG GCAACCTATC ACACCGCCGC CCTATCAGCC GCCTGCATCT GCACAACCTG GTGCACCGCC ATCTTATCAA CCACCCGCAT ATGGGCAACC TGTCACACCG CCACCCTATC AATCGCCTGC GTCTGGGCAA CCTGGTGCGC TGCCGCCCTA TCAGTCGCCT GCACCTGCAT CTGCGCAACC TGCCGCGCCG CCTTACCAGC CGCCGTATCG TCAGGAACCG GTTGGCTTTC CGCCGCCTCC AGCGACACCT GCCGCGCCGC CATATCCGGG AATGGCGCAG ATCCCGGTGT CGCCGCCGCC CCGTCGTTCA TCACACATCG GCATCATCCT CGGCATTGTG GCGGTGTTTC TGCTGATCGG AGGAGGCGCA GCCGTGGTGA TCCTCGGTCC GTGGCGCAGC CCCCTTGGAC CCGTCGCGCC CCCATCTTCT GATCAAGAAC AGCCGGCGCC GCTGACCATG ACCCTCACGC CGCAGGAACA GACTATCGTT GCTCCCGATG GTCAACCGCA CACCGACAGT CATGGCGCCA GCCTGATCGT GCCATCTGAC ATCCTCGAGG AAGCGGCGCA TGTCGAACTG ATCGCAAGCA GCGCCCAGGG AACGCTCGCT GATGCGCTGA GCCAGGACTT TACCATCGAA ACGCCTTTCT ACGCCATCGT TGCCGACAAC GACGGGCGCG GGCGCGCGTC GCTGACACTG CCAGCCGCCA GTCCTGATTC GCGTGTCGCG GTTGTGATCG ATACCACCTA TCTGGCGATC CTCGATACGC AGCCGGTCAA CGGCGTACTG CACGTCGAAG CCGCTGTGAC ACCCAAAACG TTGCCCGATA CACCGGCGCC CGGCACAACG CGCGATGGCT CGATCCACTA CGTCGTTCTC CGCGCAAAGT CTGGCAGTGC TGCATCGCCT GCCGGCACGG GCAGCGCACT GGGGCTGAAC CTTGCGCCGC GCCGCGCCTA TGCTGCTGAA GCGTCCCAGA CAAACACATA TATACCTTGA
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Protein sequence | MNPASHQTQS LCPVCGAPQP GAARFCSRCG HPLTQPPQTF EMLVTQNNAP PMRVPIPAAT VTIGRAHDST ILISDPKVSR RHLQLTWNGA AFVAEDVGSS GGTLLNGMPL RSPTILRPGD TLSIGDTILR LEIASGTATV LAPPREQAPS VPQTPTTPAH LQPPASASAQ PAALPPYQPP ASAQPAAPPP YQPPAYGQPI TPPPYQPPAS AQPGAPPSYQ PPAYGQPVTP PPYQSPASGQ PGALPPYQSP APASAQPAAP PYQPPYRQEP VGFPPPPATP AAPPYPGMAQ IPVSPPPRRS SHIGIILGIV AVFLLIGGGA AVVILGPWRS PLGPVAPPSS DQEQPAPLTM TLTPQEQTIV APDGQPHTDS HGASLIVPSD ILEEAAHVEL IASSAQGTLA DALSQDFTIE TPFYAIVADN DGRGRASLTL PAASPDSRVA VVIDTTYLAI LDTQPVNGVL HVEAAVTPKT LPDTPAPGTT RDGSIHYVVL RAKSGSAASP AGTGSALGLN LAPRRAYAAE ASQTNTYIP
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